Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.28■□□□□ 0.36
CPT1AP50416 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CPT1AP50416 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.28■□□□□ 0.36
CPT1AP50416 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.28■□□□□ 0.36
CPT1AP50416 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CPT1AP50416 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 AL590640.2-201ENST00000457038 527 ntBASIC17.28■□□□□ 0.36
CPT1AP50416 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.28■□□□□ 0.36
CPT1AP50416 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 MIR4741-201ENST00000579822 90 ntBASIC17.28■□□□□ 0.36
CPT1AP50416 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.28■□□□□ 0.36
CPT1AP50416 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
CPT1AP50416 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CPT1AP50416 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CPT1AP50416 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.28■□□□□ 0.36
CPT1AP50416 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CPT1AP50416 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CPT1AP50416 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPT1AP50416 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPT1AP50416 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CPT1AP50416 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CPT1AP50416 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
CPT1AP50416 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 AC069224.1-201ENST00000566372 1715 ntBASIC17.27■□□□□ 0.36
CPT1AP50416 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CPT1AP50416 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.27■□□□□ 0.36
CPT1AP50416 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CPT1AP50416 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.27■□□□□ 0.36
CPT1AP50416 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.27■□□□□ 0.36
CPT1AP50416 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.27■□□□□ 0.36
CPT1AP50416 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CPT1AP50416 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CPT1AP50416 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.27■□□□□ 0.36
CPT1AP50416 AC104306.2-201ENST00000451877 341 ntBASIC17.27■□□□□ 0.36
CPT1AP50416 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.27■□□□□ 0.36
CPT1AP50416 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.27■□□□□ 0.36
CPT1AP50416 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.27■□□□□ 0.36
CPT1AP50416 ZNF767P-206ENST00000513792 565 ntBASIC17.27■□□□□ 0.36
CPT1AP50416 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.27■□□□□ 0.36
CPT1AP50416 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.27■□□□□ 0.36
CPT1AP50416 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CPT1AP50416 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.27■□□□□ 0.36
CPT1AP50416 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CPT1AP50416 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPT1AP50416 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CPT1AP50416 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPT1AP50416 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CPT1AP50416 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.27■□□□□ 0.35
CPT1AP50416 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CPT1AP50416 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CPT1AP50416 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CPT1AP50416 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPT1AP50416 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPT1AP50416 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPT1AP50416 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CPT1AP50416 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.26■□□□□ 0.35
CPT1AP50416 AC018695.7-201ENST00000624587 2492 ntBASIC17.26■□□□□ 0.35
CPT1AP50416 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CPT1AP50416 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CPT1AP50416 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.26■□□□□ 0.35
CPT1AP50416 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms