Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.66■□□□□ 0.26
BRCC3P46736 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.66■□□□□ 0.26
BRCC3P46736 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCC3P46736 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
BRCC3P46736 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCC3P46736 AC104989.1-201ENST00000519711 778 ntBASIC16.66■□□□□ 0.26
BRCC3P46736 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.66■□□□□ 0.26
BRCC3P46736 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.66■□□□□ 0.26
BRCC3P46736 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.66■□□□□ 0.26
BRCC3P46736 AL022328.1-201ENST00000610050 478 ntBASIC16.66■□□□□ 0.26
BRCC3P46736 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.66■□□□□ 0.26
BRCC3P46736 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.66■□□□□ 0.26
BRCC3P46736 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.66■□□□□ 0.26
BRCC3P46736 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
BRCC3P46736 COX11-210ENST00000639671 696 ntBASIC16.66■□□□□ 0.26
BRCC3P46736 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCC3P46736 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BRCC3P46736 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.66■□□□□ 0.26
BRCC3P46736 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCC3P46736 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BRCC3P46736 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BRCC3P46736 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCC3P46736 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BRCC3P46736 PRAL-201ENST00000624952 3286 ntBASIC16.65■□□□□ 0.26
BRCC3P46736 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
BRCC3P46736 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
BRCC3P46736 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
BRCC3P46736 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 AL139384.1-201ENST00000612143 3047 ntBASIC16.65■□□□□ 0.26
BRCC3P46736 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.65■□□□□ 0.26
BRCC3P46736 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
BRCC3P46736 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.65■□□□□ 0.26
BRCC3P46736 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.65■□□□□ 0.26
BRCC3P46736 BAATP1-201ENST00000412284 1225 ntBASIC16.65■□□□□ 0.26
BRCC3P46736 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.65■□□□□ 0.26
BRCC3P46736 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.65■□□□□ 0.26
BRCC3P46736 KRT223P-202ENST00000449164 1292 ntBASIC16.65■□□□□ 0.26
BRCC3P46736 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.65■□□□□ 0.26
BRCC3P46736 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.65■□□□□ 0.26
BRCC3P46736 AP001582.1-201ENST00000525856 295 ntBASIC16.65■□□□□ 0.26
BRCC3P46736 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
BRCC3P46736 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BRCC3P46736 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.65■□□□□ 0.26
BRCC3P46736 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.65■□□□□ 0.26
BRCC3P46736 AC133552.6-201ENST00000613406 534 ntBASIC16.65■□□□□ 0.26
BRCC3P46736 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.65■□□□□ 0.26
BRCC3P46736 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
BRCC3P46736 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.65■□□□□ 0.26
BRCC3P46736 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.65■□□□□ 0.26
BRCC3P46736 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
BRCC3P46736 AC134312.5-201ENST00000568031 1313 ntBASIC16.65■□□□□ 0.26
BRCC3P46736 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BRCC3P46736 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.65■□□□□ 0.26
BRCC3P46736 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
BRCC3P46736 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.64■□□□□ 0.25
BRCC3P46736 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
BRCC3P46736 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.64■□□□□ 0.25
BRCC3P46736 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.64■□□□□ 0.25
BRCC3P46736 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
BRCC3P46736 BOLA2P3-201ENST00000404566 256 ntBASIC16.64■□□□□ 0.25
BRCC3P46736 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.64■□□□□ 0.25
BRCC3P46736 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.64■□□□□ 0.25
BRCC3P46736 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 CTBP2P5-201ENST00000454986 1264 ntBASIC16.64■□□□□ 0.25
BRCC3P46736 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.64■□□□□ 0.25
BRCC3P46736 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
BRCC3P46736 AC106760.1-201ENST00000508690 800 ntBASIC16.64■□□□□ 0.25
BRCC3P46736 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
BRCC3P46736 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
BRCC3P46736 AP005482.1-201ENST00000563722 1273 ntBASIC16.64■□□□□ 0.25
BRCC3P46736 AP001063.1-201ENST00000568332 529 ntBASIC16.64■□□□□ 0.25
BRCC3P46736 AC009486.1-201ENST00000569860 813 ntBASIC16.64■□□□□ 0.25
BRCC3P46736 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
BRCC3P46736 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.64■□□□□ 0.25
BRCC3P46736 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.64■□□□□ 0.25
BRCC3P46736 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
BRCC3P46736 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BRCC3P46736 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms