Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC1A2P43004 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 MST1L-201ENST00000442552 2185 ntBASIC15.69■□□□□ 0.1
SLC1A2P43004 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A2P43004 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A2P43004 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC1A2P43004 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A2P43004 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A2P43004 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC1A2P43004 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A2P43004 AL080243.2-201ENST00000418783 582 ntBASIC15.69■□□□□ 0.1
SLC1A2P43004 TARDBPP1-201ENST00000442013 1203 ntBASIC15.69■□□□□ 0.1
SLC1A2P43004 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A2P43004 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A2P43004 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC1A2P43004 AL512356.2-201ENST00000546955 174 ntBASIC15.69■□□□□ 0.1
SLC1A2P43004 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A2P43004 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.69■□□□□ 0.1
SLC1A2P43004 AL589739.1-201ENST00000607720 493 ntBASIC15.69■□□□□ 0.1
SLC1A2P43004 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A2P43004 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A2P43004 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 AC148477.4-201ENST00000613430 1793 ntBASIC15.69■□□□□ 0.1
SLC1A2P43004 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC1A2P43004 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 AC023024.2-201ENST00000623561 1993 ntBASIC15.69■□□□□ 0.1
SLC1A2P43004 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SLC1A2P43004 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC1A2P43004 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SLC1A2P43004 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SLC1A2P43004 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC1A2P43004 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC1A2P43004 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A2P43004 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A2P43004 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SLC1A2P43004 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A2P43004 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.68■□□□□ 0.1
SLC1A2P43004 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SLC1A2P43004 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A2P43004 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC1A2P43004 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SLC1A2P43004 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SLC1A2P43004 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SLC1A2P43004 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC1A2P43004 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.68■□□□□ 0.1
SLC1A2P43004 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.68■□□□□ 0.1
SLC1A2P43004 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC1A2P43004 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.68■□□□□ 0.1
SLC1A2P43004 SNHG9-202ENST00000564014 471 ntBASIC15.68■□□□□ 0.1
SLC1A2P43004 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC1A2P43004 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC1A2P43004 LINC00628-201ENST00000628516 1289 ntBASIC15.68■□□□□ 0.1
SLC1A2P43004 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC1A2P43004 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC1A2P43004 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.68■□□□□ 0.1
SLC1A2P43004 CETN4P-206ENST00000642099 2168 ntBASIC15.68■□□□□ 0.1
SLC1A2P43004 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC1A2P43004 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SLC1A2P43004 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A2P43004 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
SLC1A2P43004 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC1A2P43004 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC1A2P43004 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms