Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SLC1A3P43003 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC1A3P43003 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SLC1A3P43003 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SLC1A3P43003 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC1A3P43003 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC1A3P43003 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC1A3P43003 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC1A3P43003 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.53□□□□□ -0.08
SLC1A3P43003 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC1A3P43003 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC1A3P43003 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC1A3P43003 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC1A3P43003 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.53□□□□□ -0.08
SLC1A3P43003 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC1A3P43003 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SLC1A3P43003 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC1A3P43003 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC1A3P43003 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC1A3P43003 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.53□□□□□ -0.08
SLC1A3P43003 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 AC018892.3-201ENST00000623986 2499 ntBASIC14.53□□□□□ -0.08
SLC1A3P43003 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.53□□□□□ -0.08
SLC1A3P43003 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SLC1A3P43003 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SLC1A3P43003 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SLC1A3P43003 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.52□□□□□ -0.08
SLC1A3P43003 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC1A3P43003 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SLC1A3P43003 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.52□□□□□ -0.08
SLC1A3P43003 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.52□□□□□ -0.08
SLC1A3P43003 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SLC1A3P43003 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SLC1A3P43003 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SLC1A3P43003 DNAJB3-202ENST00000449667 1266 ntBASIC14.52□□□□□ -0.09
SLC1A3P43003 PHKG1P2-201ENST00000457537 863 ntBASIC14.52□□□□□ -0.09
SLC1A3P43003 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A3P43003 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC1A3P43003 BANF1P1-201ENST00000553684 263 ntBASIC14.52□□□□□ -0.09
SLC1A3P43003 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A3P43003 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.52□□□□□ -0.09
SLC1A3P43003 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 AL450472.2-201ENST00000603663 1156 ntBASIC14.52□□□□□ -0.09
SLC1A3P43003 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.52□□□□□ -0.09
SLC1A3P43003 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC1A3P43003 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A3P43003 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SLC1A3P43003 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A3P43003 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.52□□□□□ -0.09
SLC1A3P43003 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC1A3P43003 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
SLC1A3P43003 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC1A3P43003 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SLC1A3P43003 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.52□□□□□ -0.09
SLC1A3P43003 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms