Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TM4SF1P30408 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.21■□□□□ 0.67
TM4SF1P30408 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.21■□□□□ 0.67
TM4SF1P30408 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.21■□□□□ 0.67
TM4SF1P30408 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF1P30408 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.21■□□□□ 0.67
TM4SF1P30408 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TM4SF1P30408 AC091544.8-201ENST00000619490 361 ntBASIC19.21■□□□□ 0.67
TM4SF1P30408 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.21■□□□□ 0.67
TM4SF1P30408 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TM4SF1P30408 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF1P30408 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TM4SF1P30408 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TM4SF1P30408 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF1P30408 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF1P30408 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF1P30408 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TM4SF1P30408 AC092364.2-201ENST00000596710 2692 ntBASIC19.2■□□□□ 0.66
TM4SF1P30408 AC124067.4-201ENST00000519691 2379 ntBASIC19.2■□□□□ 0.66
TM4SF1P30408 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.2■□□□□ 0.66
TM4SF1P30408 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF1P30408 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF1P30408 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF1P30408 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF1P30408 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TM4SF1P30408 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.2■□□□□ 0.66
TM4SF1P30408 AC012618.1-201ENST00000461223 412 ntBASIC19.2■□□□□ 0.66
TM4SF1P30408 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.2■□□□□ 0.66
TM4SF1P30408 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC19.2■□□□□ 0.66
TM4SF1P30408 AC026740.1-201ENST00000607068 791 ntBASIC19.2■□□□□ 0.66
TM4SF1P30408 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TM4SF1P30408 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TM4SF1P30408 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF1P30408 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TM4SF1P30408 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TM4SF1P30408 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF1P30408 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF1P30408 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TM4SF1P30408 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 RNF165-205ENST00000588679 2904 ntBASIC19.19■□□□□ 0.66
TM4SF1P30408 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
TM4SF1P30408 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TM4SF1P30408 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC19.19■□□□□ 0.66
TM4SF1P30408 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC19.19■□□□□ 0.66
TM4SF1P30408 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.19■□□□□ 0.66
TM4SF1P30408 AL161670.2-201ENST00000557650 1227 ntBASIC19.19■□□□□ 0.66
TM4SF1P30408 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 AL353726.2-201ENST00000623259 884 ntBASIC19.19■□□□□ 0.66
TM4SF1P30408 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.19■□□□□ 0.66
TM4SF1P30408 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.19■□□□□ 0.66
TM4SF1P30408 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF1P30408 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.19■□□□□ 0.66
TM4SF1P30408 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
TM4SF1P30408 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
TM4SF1P30408 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.19■□□□□ 0.66
TM4SF1P30408 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.19■□□□□ 0.66
TM4SF1P30408 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TM4SF1P30408 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TM4SF1P30408 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
TM4SF1P30408 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TM4SF1P30408 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
TM4SF1P30408 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.18■□□□□ 0.66
TM4SF1P30408 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 AC069224.1-201ENST00000566372 1715 ntBASIC19.18■□□□□ 0.66
TM4SF1P30408 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.18■□□□□ 0.66
TM4SF1P30408 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF1P30408 AL136309.1-201ENST00000403917 691 ntBASIC19.18■□□□□ 0.66
TM4SF1P30408 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TM4SF1P30408 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.18■□□□□ 0.66
TM4SF1P30408 AC104073.2-201ENST00000453737 312 ntBASIC19.18■□□□□ 0.66
TM4SF1P30408 RNMTL1P1-201ENST00000454103 560 ntBASIC19.18■□□□□ 0.66
TM4SF1P30408 AC022616.1-201ENST00000518688 554 ntBASIC19.18■□□□□ 0.66
TM4SF1P30408 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.18■□□□□ 0.66
TM4SF1P30408 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.18■□□□□ 0.66
TM4SF1P30408 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms