Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SHC1P29353 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 BNIP3P1-202ENST00000550043 1585 ntBASIC14.49□□□□□ -0.09
SHC1P29353 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 MIR943-201ENST00000401286 94 ntBASIC14.49□□□□□ -0.09
SHC1P29353 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SHC1P29353 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.49□□□□□ -0.09
SHC1P29353 AC092580.3-201ENST00000430932 139 ntBASIC14.49□□□□□ -0.09
SHC1P29353 AL139010.1-201ENST00000454878 894 ntBASIC14.49□□□□□ -0.09
SHC1P29353 CYMP-203ENST00000474680 1263 ntBASIC14.49□□□□□ -0.09
SHC1P29353 AC067863.1-201ENST00000494933 530 ntBASIC14.49□□□□□ -0.09
SHC1P29353 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 AC140878.1-201ENST00000565277 250 ntBASIC14.49□□□□□ -0.09
SHC1P29353 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.49□□□□□ -0.09
SHC1P29353 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SHC1P29353 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.49□□□□□ -0.09
SHC1P29353 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SHC1P29353 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHC1P29353 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.49□□□□□ -0.09
SHC1P29353 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
SHC1P29353 AL035456.1-201ENST00000456064 1369 ntBASIC14.48□□□□□ -0.09
SHC1P29353 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.48□□□□□ -0.09
SHC1P29353 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.48□□□□□ -0.09
SHC1P29353 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SHC1P29353 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SHC1P29353 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SHC1P29353 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SHC1P29353 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.48□□□□□ -0.09
SHC1P29353 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.48□□□□□ -0.09
SHC1P29353 AC069120.2-201ENST00000524091 540 ntBASIC14.48□□□□□ -0.09
SHC1P29353 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.48□□□□□ -0.09
SHC1P29353 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.48□□□□□ -0.09
SHC1P29353 AC026979.3-201ENST00000607315 403 ntBASIC14.48□□□□□ -0.09
SHC1P29353 AL138828.2-201ENST00000615812 383 ntBASIC14.48□□□□□ -0.09
SHC1P29353 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.48□□□□□ -0.09
SHC1P29353 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.48□□□□□ -0.09
SHC1P29353 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.48□□□□□ -0.09
SHC1P29353 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.48□□□□□ -0.09
SHC1P29353 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SHC1P29353 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SHC1P29353 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.47□□□□□ -0.09
SHC1P29353 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SHC1P29353 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.47□□□□□ -0.09
SHC1P29353 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.47□□□□□ -0.09
SHC1P29353 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SHC1P29353 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.47□□□□□ -0.09
SHC1P29353 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.47□□□□□ -0.09
SHC1P29353 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.47□□□□□ -0.09
SHC1P29353 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.47□□□□□ -0.09
SHC1P29353 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.47□□□□□ -0.09
SHC1P29353 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.47□□□□□ -0.09
SHC1P29353 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SHC1P29353 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms