Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HCG11-201ENST00000411553 5696 ntBASIC18.97■□□□□ 0.63
KCNA3P22001 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
KCNA3P22001 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.97■□□□□ 0.63
KCNA3P22001 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.97■□□□□ 0.63
KCNA3P22001 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA3P22001 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA3P22001 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA3P22001 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA3P22001 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.97■□□□□ 0.63
KCNA3P22001 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
KCNA3P22001 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNA3P22001 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 AL157791.1-201ENST00000553667 1699 ntBASIC18.96■□□□□ 0.63
KCNA3P22001 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
KCNA3P22001 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNA3P22001 AC234644.1-201ENST00000406065 370 ntBASIC18.96■□□□□ 0.63
KCNA3P22001 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KCNA3P22001 NOC2LP1-201ENST00000450578 752 ntBASIC18.96■□□□□ 0.63
KCNA3P22001 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNA3P22001 AC106794.1-201ENST00000506935 792 ntBASIC18.96■□□□□ 0.63
KCNA3P22001 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.96■□□□□ 0.63
KCNA3P22001 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.96■□□□□ 0.63
KCNA3P22001 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KCNA3P22001 AC242376.1-201ENST00000559033 726 ntBASIC18.96■□□□□ 0.63
KCNA3P22001 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNA3P22001 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.96■□□□□ 0.63
KCNA3P22001 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.96■□□□□ 0.63
KCNA3P22001 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
KCNA3P22001 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 AC007787.1-201ENST00000588095 1583 ntBASIC18.96■□□□□ 0.63
KCNA3P22001 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
KCNA3P22001 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.96■□□□□ 0.63
KCNA3P22001 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.96■□□□□ 0.63
KCNA3P22001 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
KCNA3P22001 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.96■□□□□ 0.63
KCNA3P22001 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
KCNA3P22001 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
KCNA3P22001 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
KCNA3P22001 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.95■□□□□ 0.62
KCNA3P22001 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
KCNA3P22001 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.95■□□□□ 0.62
KCNA3P22001 AC125604.1-201ENST00000496255 707 ntBASIC18.95■□□□□ 0.62
KCNA3P22001 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNA3P22001 AC092171.5-201ENST00000608012 942 ntBASIC18.95■□□□□ 0.62
KCNA3P22001 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.95■□□□□ 0.62
KCNA3P22001 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.95■□□□□ 0.62
KCNA3P22001 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
KCNA3P22001 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
KCNA3P22001 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
KCNA3P22001 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNA3P22001 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.94■□□□□ 0.62
KCNA3P22001 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
KCNA3P22001 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
KCNA3P22001 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.94■□□□□ 0.62
KCNA3P22001 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms