Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN3P20807 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN3P20807 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CAPN3P20807 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.22■□□□□ 0.03
CAPN3P20807 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CAPN3P20807 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.21■□□□□ 0.03
CAPN3P20807 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.21■□□□□ 0.03
CAPN3P20807 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.21■□□□□ 0.03
CAPN3P20807 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CAPN3P20807 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.21■□□□□ 0.03
CAPN3P20807 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.21■□□□□ 0.03
CAPN3P20807 LINC00552-201ENST00000625151 2579 ntBASIC15.21■□□□□ 0.03
CAPN3P20807 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.21■□□□□ 0.03
CAPN3P20807 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CAPN3P20807 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.21■□□□□ 0.03
CAPN3P20807 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.21■□□□□ 0.03
CAPN3P20807 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.21■□□□□ 0.03
CAPN3P20807 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.21■□□□□ 0.03
CAPN3P20807 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CAPN3P20807 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.21■□□□□ 0.03
CAPN3P20807 RNA5SP421-201ENST00000516864 134 ntBASIC15.21■□□□□ 0.03
CAPN3P20807 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.21■□□□□ 0.03
CAPN3P20807 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.21■□□□□ 0.03
CAPN3P20807 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.21■□□□□ 0.03
CAPN3P20807 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.21■□□□□ 0.03
CAPN3P20807 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.21■□□□□ 0.03
CAPN3P20807 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.21■□□□□ 0.03
CAPN3P20807 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 AC093028.1-201ENST00000622998 982 ntBASIC15.21■□□□□ 0.03
CAPN3P20807 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.21■□□□□ 0.03
CAPN3P20807 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.21■□□□□ 0.03
CAPN3P20807 AC007064.4-201ENST00000637740 555 ntBASIC15.21■□□□□ 0.03
CAPN3P20807 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.21■□□□□ 0.03
CAPN3P20807 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CAPN3P20807 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.21■□□□□ 0.03
CAPN3P20807 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CAPN3P20807 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CAPN3P20807 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.21■□□□□ 0.02
CAPN3P20807 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CAPN3P20807 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CAPN3P20807 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
CAPN3P20807 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.21■□□□□ 0.02
CAPN3P20807 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CAPN3P20807 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CAPN3P20807 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CAPN3P20807 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CAPN3P20807 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.2■□□□□ 0.02
CAPN3P20807 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.2■□□□□ 0.02
CAPN3P20807 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.2■□□□□ 0.02
CAPN3P20807 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.2■□□□□ 0.02
CAPN3P20807 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CAPN3P20807 AC025580.3-201ENST00000617932 1424 ntBASIC15.2■□□□□ 0.02
CAPN3P20807 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.2■□□□□ 0.02
CAPN3P20807 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.2■□□□□ 0.02
CAPN3P20807 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.2■□□□□ 0.02
CAPN3P20807 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CAPN3P20807 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CAPN3P20807 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.2■□□□□ 0.02
CAPN3P20807 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.2■□□□□ 0.02
CAPN3P20807 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.2■□□□□ 0.02
CAPN3P20807 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.2■□□□□ 0.02
CAPN3P20807 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.2■□□□□ 0.02
CAPN3P20807 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.2■□□□□ 0.02
CAPN3P20807 AC061975.2-201ENST00000581722 295 ntBASIC15.2■□□□□ 0.02
CAPN3P20807 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.2■□□□□ 0.02
CAPN3P20807 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.2■□□□□ 0.02
CAPN3P20807 AC004835.2-201ENST00000603762 682 ntBASIC15.2■□□□□ 0.02
CAPN3P20807 AC027612.4-201ENST00000605371 583 ntBASIC15.2■□□□□ 0.02
CAPN3P20807 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.2■□□□□ 0.02
CAPN3P20807 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms