Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB3BP20337 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RAB3BP20337 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 AC126335.2-201ENST00000623362 4637 ntBASIC13.87□□□□□ -0.19
RAB3BP20337 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RAB3BP20337 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.87□□□□□ -0.19
RAB3BP20337 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB3BP20337 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RAB3BP20337 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB3BP20337 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB3BP20337 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RAB3BP20337 AL122018.1-201ENST00000446607 2310 ntBASIC13.86□□□□□ -0.19
RAB3BP20337 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB3BP20337 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB3BP20337 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RAB3BP20337 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
RAB3BP20337 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.86□□□□□ -0.19
RAB3BP20337 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB3BP20337 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB3BP20337 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
RAB3BP20337 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.86□□□□□ -0.19
RAB3BP20337 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
RAB3BP20337 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 AC073439.1-201ENST00000624121 1774 ntBASIC13.86□□□□□ -0.19
RAB3BP20337 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RAB3BP20337 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RAB3BP20337 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB3BP20337 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RAB3BP20337 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
RAB3BP20337 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RAB3BP20337 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB3BP20337 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB3BP20337 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.85□□□□□ -0.19
RAB3BP20337 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.85□□□□□ -0.19
RAB3BP20337 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB3BP20337 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB3BP20337 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB3BP20337 CXCL1P1-201ENST00000502804 216 ntBASIC13.85□□□□□ -0.19
RAB3BP20337 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.85□□□□□ -0.19
RAB3BP20337 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.85□□□□□ -0.19
RAB3BP20337 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.85□□□□□ -0.19
RAB3BP20337 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.85□□□□□ -0.19
RAB3BP20337 AC243562.2-201ENST00000561247 970 ntBASIC13.85□□□□□ -0.19
RAB3BP20337 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.85□□□□□ -0.19
RAB3BP20337 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB3BP20337 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 OR7E47P-204ENST00000575924 449 ntBASIC13.85□□□□□ -0.19
RAB3BP20337 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RAB3BP20337 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.85□□□□□ -0.19
RAB3BP20337 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms