Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NCK1P16333 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
NCK1P16333 AL691432.1-201ENST00000596308 1422 ntBASIC14.94□□□□□ -0.02
NCK1P16333 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
NCK1P16333 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.94□□□□□ -0.02
NCK1P16333 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.94□□□□□ -0.02
NCK1P16333 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NCK1P16333 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.94□□□□□ -0.02
NCK1P16333 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NCK1P16333 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.94□□□□□ -0.02
NCK1P16333 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.94□□□□□ -0.02
NCK1P16333 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.94□□□□□ -0.02
NCK1P16333 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.94□□□□□ -0.02
NCK1P16333 AC243562.2-201ENST00000561247 970 ntBASIC14.94□□□□□ -0.02
NCK1P16333 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.94□□□□□ -0.02
NCK1P16333 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NCK1P16333 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.94□□□□□ -0.02
NCK1P16333 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NCK1P16333 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.94□□□□□ -0.02
NCK1P16333 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 MROH4P-201ENST00000431302 1578 ntBASIC14.94□□□□□ -0.02
NCK1P16333 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NCK1P16333 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.93□□□□□ -0.02
NCK1P16333 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.93□□□□□ -0.02
NCK1P16333 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NCK1P16333 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NCK1P16333 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.93□□□□□ -0.02
NCK1P16333 AF186996.4-201ENST00000467186 377 ntBASIC14.93□□□□□ -0.02
NCK1P16333 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.93□□□□□ -0.02
NCK1P16333 UNC93B7-201ENST00000509439 705 ntBASIC14.93□□□□□ -0.02
NCK1P16333 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.93□□□□□ -0.02
NCK1P16333 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.93□□□□□ -0.02
NCK1P16333 FAM215A-202ENST00000632077 792 ntBASIC14.93□□□□□ -0.02
NCK1P16333 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
NCK1P16333 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.93□□□□□ -0.02
NCK1P16333 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.93□□□□□ -0.02
NCK1P16333 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NCK1P16333 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.93□□□□□ -0.02
NCK1P16333 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
NCK1P16333 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NCK1P16333 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NCK1P16333 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NCK1P16333 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NCK1P16333 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NCK1P16333 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
NCK1P16333 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NCK1P16333 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NCK1P16333 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.92□□□□□ -0.02
NCK1P16333 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms