Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AC092127.1-201ENST00000567093 3455 ntBASIC16.28■□□□□ 0.2
BRAFP15056 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
BRAFP15056 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
BRAFP15056 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
BRAFP15056 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.27■□□□□ 0.2
BRAFP15056 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
BRAFP15056 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
BRAFP15056 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.27■□□□□ 0.2
BRAFP15056 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.27■□□□□ 0.2
BRAFP15056 SPDYE11-202ENST00000450699 704 ntBASIC16.27■□□□□ 0.2
BRAFP15056 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 AC079140.1-201ENST00000508039 487 ntBASIC16.27■□□□□ 0.2
BRAFP15056 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.27■□□□□ 0.2
BRAFP15056 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.27■□□□□ 0.2
BRAFP15056 AC093520.2-201ENST00000561830 333 ntBASIC16.27■□□□□ 0.2
BRAFP15056 SPDYE9P-201ENST00000570642 692 ntBASIC16.27■□□□□ 0.2
BRAFP15056 AC004835.2-201ENST00000603762 682 ntBASIC16.27■□□□□ 0.2
BRAFP15056 SPDYE10P-202ENST00000612005 668 ntBASIC16.27■□□□□ 0.2
BRAFP15056 SPDYE8P-202ENST00000612377 668 ntBASIC16.27■□□□□ 0.2
BRAFP15056 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.27■□□□□ 0.2
BRAFP15056 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BRAFP15056 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
BRAFP15056 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
BRAFP15056 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.27■□□□□ 0.2
BRAFP15056 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BRAFP15056 AC112693.3-201ENST00000624819 1983 ntBASIC16.27■□□□□ 0.19
BRAFP15056 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.27■□□□□ 0.19
BRAFP15056 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BRAFP15056 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.27■□□□□ 0.19
BRAFP15056 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BRAFP15056 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BRAFP15056 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.27■□□□□ 0.19
BRAFP15056 WASH6P-202ENST00000359512 1437 ntBASIC16.27■□□□□ 0.19
BRAFP15056 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BRAFP15056 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.27■□□□□ 0.19
BRAFP15056 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.26■□□□□ 0.19
BRAFP15056 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.26■□□□□ 0.19
BRAFP15056 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BRAFP15056 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
BRAFP15056 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 RN7SL589P-201ENST00000481268 310 ntBASIC16.26■□□□□ 0.19
BRAFP15056 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.26■□□□□ 0.19
BRAFP15056 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.26■□□□□ 0.19
BRAFP15056 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.26■□□□□ 0.19
BRAFP15056 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.26■□□□□ 0.19
BRAFP15056 AC021097.1-201ENST00000607902 574 ntBASIC16.26■□□□□ 0.19
BRAFP15056 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.26■□□□□ 0.19
BRAFP15056 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.26■□□□□ 0.19
BRAFP15056 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.26■□□□□ 0.19
BRAFP15056 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
BRAFP15056 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.26■□□□□ 0.19
BRAFP15056 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.26■□□□□ 0.19
BRAFP15056 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BRAFP15056 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms