Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CFTRP13569 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC26.21■■□□□ 1.79
CFTRP13569 MTHFR-217ENST00000641820 1569 ntBASIC26.21■■□□□ 1.79
CFTRP13569 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CFTRP13569 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC26.2■■□□□ 1.79
CFTRP13569 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CFTRP13569 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CFTRP13569 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CFTRP13569 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
CFTRP13569 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC26.2■■□□□ 1.79
CFTRP13569 FLJ38576-201ENST00000623820 2459 ntBASIC26.2■■□□□ 1.78
CFTRP13569 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC26.2■■□□□ 1.78
CFTRP13569 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFTRP13569 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC26.2■■□□□ 1.78
CFTRP13569 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFTRP13569 OR2K2-202ENST00000374428 1038 ntBASIC26.2■■□□□ 1.78
CFTRP13569 AK6-201ENST00000380818 1183 ntTSL 2 BASIC26.2■■□□□ 1.78
CFTRP13569 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
CFTRP13569 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFTRP13569 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC26.2■■□□□ 1.78
CFTRP13569 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CFTRP13569 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC26.2■■□□□ 1.78
CFTRP13569 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC26.2■■□□□ 1.78
CFTRP13569 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
CFTRP13569 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CFTRP13569 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC26.2■■□□□ 1.78
CFTRP13569 MIR3677-201ENST00000578964 60 ntBASIC26.2■■□□□ 1.78
CFTRP13569 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC26.2■■□□□ 1.78
CFTRP13569 GMFG-209ENST00000600322 622 ntTSL 5 BASIC26.2■■□□□ 1.78
CFTRP13569 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC26.2■■□□□ 1.78
CFTRP13569 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CFTRP13569 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFTRP13569 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC26.2■■□□□ 1.78
CFTRP13569 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFTRP13569 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC26.2■■□□□ 1.78
CFTRP13569 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC26.2■■□□□ 1.78
CFTRP13569 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFTRP13569 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CFTRP13569 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFTRP13569 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFTRP13569 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC26.19■■□□□ 1.78
CFTRP13569 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFTRP13569 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFTRP13569 RN7SL818P-201ENST00000485099 259 ntBASIC26.19■■□□□ 1.78
CFTRP13569 NDUFS6P1-201ENST00000485187 316 ntBASIC26.19■■□□□ 1.78
CFTRP13569 RN7SL67P-201ENST00000492147 296 ntBASIC26.19■■□□□ 1.78
CFTRP13569 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC26.19■■□□□ 1.78
CFTRP13569 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC26.19■■□□□ 1.78
CFTRP13569 MIR4649-201ENST00000582839 64 ntBASIC26.19■■□□□ 1.78
CFTRP13569 RN7SL725P-201ENST00000606439 259 ntBASIC26.19■■□□□ 1.78
CFTRP13569 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC26.19■■□□□ 1.78
CFTRP13569 SP100-205ENST00000409824 1802 ntTSL 5 BASIC26.19■■□□□ 1.78
CFTRP13569 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFTRP13569 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CFTRP13569 AMT-204ENST00000427987 1646 ntTSL 5 BASIC26.19■■□□□ 1.78
CFTRP13569 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFTRP13569 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CFTRP13569 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CFTRP13569 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CFTRP13569 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC26.19■■□□□ 1.78
CFTRP13569 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CFTRP13569 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFTRP13569 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CFTRP13569 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC26.18■■□□□ 1.78
CFTRP13569 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CFTRP13569 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFTRP13569 AC078875.1-201ENST00000431907 724 ntBASIC26.18■■□□□ 1.78
CFTRP13569 FOS-204ENST00000554617 796 ntTSL 2 BASIC26.18■■□□□ 1.78
CFTRP13569 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CFTRP13569 NAT9-211ENST00000580632 799 ntTSL 3 BASIC26.18■■□□□ 1.78
CFTRP13569 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
CFTRP13569 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFTRP13569 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
CFTRP13569 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
CFTRP13569 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CFTRP13569 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CFTRP13569 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
CFTRP13569 RN7SL258P-201ENST00000478664 300 ntBASIC26.17■■□□□ 1.78
CFTRP13569 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC26.17■■□□□ 1.78
CFTRP13569 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
CFTRP13569 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC26.17■■□□□ 1.78
CFTRP13569 RPL17P45-201ENST00000586289 509 ntBASIC26.17■■□□□ 1.78
CFTRP13569 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC26.17■■□□□ 1.78
CFTRP13569 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC26.17■■□□□ 1.78
CFTRP13569 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CFTRP13569 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CFTRP13569 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 MBLAC2-202ENST00000514906 1936 ntBASIC26.17■■□□□ 1.78
CFTRP13569 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
CFTRP13569 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CFTRP13569 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC26.17■■□□□ 1.78
CFTRP13569 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms