Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 MIR648-201ENST00000385046 94 ntBASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 MIR1909-201ENST00000411312 80 ntBASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 TMEM14DP-201ENST00000422205 345 ntBASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 AC022210.1-201ENST00000449856 793 ntBASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 ENPP7P5-201ENST00000541031 1031 ntBASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 ALOX12P2-203ENST00000570921 1945 ntBASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAB40ALP0C0E4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40ALP0C0E4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40ALP0C0E4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.83□□□□□ -0.03
RAB40ALP0C0E4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40ALP0C0E4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40ALP0C0E4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40ALP0C0E4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RAB40ALP0C0E4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.83□□□□□ -0.03
RAB40ALP0C0E4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RAB40ALP0C0E4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 MIR658-201ENST00000385210 100 ntBASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 ACTG1P3-201ENST00000431775 1114 ntBASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 KRT43P-201ENST00000434019 910 ntBASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 HNRNPUP1-201ENST00000554987 333 ntBASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 AP005482.1-201ENST00000563722 1273 ntBASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 BTNL10-201ENST00000595971 695 ntBASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 AC134407.2-201ENST00000625089 1978 ntBASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.83□□□□□ -0.04
RAB40ALP0C0E4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms