Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC6P09630 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC6P09630 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
HOXC6P09630 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
HOXC6P09630 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC6P09630 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC6P09630 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC6P09630 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HOXC6P09630 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.62■□□□□ 0.41
HOXC6P09630 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.62■□□□□ 0.41
HOXC6P09630 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC6P09630 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC6P09630 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HOXC6P09630 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC6P09630 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC6P09630 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HOXC6P09630 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HOXC6P09630 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HOXC6P09630 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 AC114812.1-204ENST00000449669 728 ntBASIC17.61■□□□□ 0.41
HOXC6P09630 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXC6P09630 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
HOXC6P09630 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXC6P09630 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
HOXC6P09630 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC6P09630 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXC6P09630 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXC6P09630 AL021578.1-201ENST00000613646 709 ntBASIC17.61■□□□□ 0.41
HOXC6P09630 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC6P09630 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 AC006449.6-201ENST00000612330 2296 ntBASIC17.61■□□□□ 0.41
HOXC6P09630 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HOXC6P09630 AL118508.1-201ENST00000613502 2345 ntBASIC17.61■□□□□ 0.41
HOXC6P09630 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXC6P09630 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HOXC6P09630 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXC6P09630 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXC6P09630 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXC6P09630 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HOXC6P09630 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXC6P09630 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HOXC6P09630 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.6■□□□□ 0.41
HOXC6P09630 KLF2P2-201ENST00000416807 1039 ntBASIC17.6■□□□□ 0.41
HOXC6P09630 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXC6P09630 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.6■□□□□ 0.41
HOXC6P09630 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
HOXC6P09630 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXC6P09630 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
HOXC6P09630 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXC6P09630 ACTG1P17-201ENST00000558391 1119 ntBASIC17.6■□□□□ 0.41
HOXC6P09630 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HOXC6P09630 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 AL096828.3-201ENST00000615354 462 ntBASIC17.6■□□□□ 0.41
HOXC6P09630 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
HOXC6P09630 PRSS30P-206ENST00000641773 873 ntBASIC17.6■□□□□ 0.41
HOXC6P09630 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
HOXC6P09630 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXC6P09630 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXC6P09630 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
HOXC6P09630 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXC6P09630 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
HOXC6P09630 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC6P09630 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC6P09630 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC6P09630 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC6P09630 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
HOXC6P09630 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXC6P09630 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms