Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SRPRAP08240 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.83■□□□□ 0.12
SRPRAP08240 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRPRAP08240 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SRPRAP08240 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SRPRAP08240 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRPRAP08240 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SRPRAP08240 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
SRPRAP08240 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SRPRAP08240 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.82■□□□□ 0.12
SRPRAP08240 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.82■□□□□ 0.12
SRPRAP08240 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.82■□□□□ 0.12
SRPRAP08240 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SRPRAP08240 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.82■□□□□ 0.12
SRPRAP08240 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 AC234783.1-201ENST00000441761 496 ntBASIC15.82■□□□□ 0.12
SRPRAP08240 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.82■□□□□ 0.12
SRPRAP08240 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.82■□□□□ 0.12
SRPRAP08240 AP001063.1-201ENST00000568332 529 ntBASIC15.82■□□□□ 0.12
SRPRAP08240 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.82■□□□□ 0.12
SRPRAP08240 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.82■□□□□ 0.12
SRPRAP08240 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.82■□□□□ 0.12
SRPRAP08240 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.82■□□□□ 0.12
SRPRAP08240 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SRPRAP08240 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.82■□□□□ 0.12
SRPRAP08240 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.82■□□□□ 0.12
SRPRAP08240 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SRPRAP08240 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRPRAP08240 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRPRAP08240 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRPRAP08240 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRPRAP08240 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.81■□□□□ 0.12
SRPRAP08240 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRPRAP08240 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.81■□□□□ 0.12
SRPRAP08240 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SRPRAP08240 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SRPRAP08240 BOLA2P3-201ENST00000404566 256 ntBASIC15.81■□□□□ 0.12
SRPRAP08240 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.81■□□□□ 0.12
SRPRAP08240 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.81■□□□□ 0.12
SRPRAP08240 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.81■□□□□ 0.12
SRPRAP08240 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRPRAP08240 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SRPRAP08240 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.81■□□□□ 0.12
SRPRAP08240 GAPDHP40-201ENST00000505218 1006 ntBASIC15.81■□□□□ 0.12
SRPRAP08240 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SRPRAP08240 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.81■□□□□ 0.12
SRPRAP08240 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.81■□□□□ 0.12
SRPRAP08240 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.81■□□□□ 0.12
SRPRAP08240 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
SRPRAP08240 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.81■□□□□ 0.12
SRPRAP08240 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRPRAP08240 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SRPRAP08240 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.81■□□□□ 0.12
SRPRAP08240 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.81■□□□□ 0.12
SRPRAP08240 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.81■□□□□ 0.12
SRPRAP08240 CLUHP6-201ENST00000580789 941 ntBASIC15.81■□□□□ 0.12
SRPRAP08240 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.81■□□□□ 0.12
SRPRAP08240 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.81■□□□□ 0.12
SRPRAP08240 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SRPRAP08240 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.81■□□□□ 0.12
SRPRAP08240 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SRPRAP08240 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SRPRAP08240 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SRPRAP08240 AL512343.1-201ENST00000605837 169 ntBASIC15.81■□□□□ 0.12
SRPRAP08240 AC107373.2-201ENST00000607735 490 ntBASIC15.81■□□□□ 0.12
SRPRAP08240 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.81■□□□□ 0.12
SRPRAP08240 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.81■□□□□ 0.12
SRPRAP08240 MIR6752-201ENST00000618442 71 ntBASIC15.81■□□□□ 0.12
SRPRAP08240 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.81■□□□□ 0.12
SRPRAP08240 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.81■□□□□ 0.12
SRPRAP08240 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.81■□□□□ 0.12
SRPRAP08240 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SRPRAP08240 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SRPRAP08240 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms