Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KRT6AP02538 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
KRT6AP02538 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT6AP02538 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 AC127383.1-201ENST00000444697 1800 ntBASIC15.32■□□□□ 0.04
KRT6AP02538 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
KRT6AP02538 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT6AP02538 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.32■□□□□ 0.04
KRT6AP02538 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.32■□□□□ 0.04
KRT6AP02538 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT6AP02538 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 AC105339.1-204ENST00000636249 355 ntBASIC15.32■□□□□ 0.04
KRT6AP02538 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT6AP02538 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT6AP02538 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 AC138035.3-201ENST00000622706 2791 ntBASIC15.32■□□□□ 0.04
KRT6AP02538 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT6AP02538 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KRT6AP02538 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 AC097376.2-205ENST00000610159 5334 ntBASIC15.32■□□□□ 0.04
KRT6AP02538 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT6AP02538 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT6AP02538 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KRT6AP02538 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KRT6AP02538 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT6AP02538 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KRT6AP02538 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT6AP02538 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT6AP02538 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT6AP02538 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT6AP02538 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.31■□□□□ 0.04
KRT6AP02538 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.31■□□□□ 0.04
KRT6AP02538 AC022145.2-201ENST00000598203 171 ntBASIC15.31■□□□□ 0.04
KRT6AP02538 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.31■□□□□ 0.04
KRT6AP02538 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT6AP02538 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
KRT6AP02538 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT6AP02538 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
KRT6AP02538 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KRT6AP02538 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
KRT6AP02538 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KRT6AP02538 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT6AP02538 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT6AP02538 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KRT6AP02538 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT6AP02538 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KRT6AP02538 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT6AP02538 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT6AP02538 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
KRT6AP02538 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT6AP02538 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KRT6AP02538 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT6AP02538 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT6AP02538 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
KRT6AP02538 KRT18P32-201ENST00000424695 1287 ntBASIC15.3■□□□□ 0.04
KRT6AP02538 AL645939.2-201ENST00000427340 991 ntBASIC15.3■□□□□ 0.04
KRT6AP02538 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT6AP02538 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT6AP02538 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT6AP02538 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms