Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TIMP1P01033 AL158070.2-201ENST00000623713 1621 ntBASIC16.75■□□□□ 0.27
TIMP1P01033 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.75■□□□□ 0.27
TIMP1P01033 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.75■□□□□ 0.27
TIMP1P01033 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TIMP1P01033 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TIMP1P01033 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.75■□□□□ 0.27
TIMP1P01033 RNMTL1P1-201ENST00000454103 560 ntBASIC16.75■□□□□ 0.27
TIMP1P01033 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.75■□□□□ 0.27
TIMP1P01033 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.75■□□□□ 0.27
TIMP1P01033 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.75■□□□□ 0.27
TIMP1P01033 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.75■□□□□ 0.27
TIMP1P01033 AC106820.3-201ENST00000561653 397 ntBASIC16.75■□□□□ 0.27
TIMP1P01033 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.75■□□□□ 0.27
TIMP1P01033 RN7SL163P-201ENST00000583100 276 ntBASIC16.75■□□□□ 0.27
TIMP1P01033 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.75■□□□□ 0.27
TIMP1P01033 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 AC004923.1-202ENST00000642106 209 ntBASIC16.75■□□□□ 0.27
TIMP1P01033 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TIMP1P01033 AC006449.6-201ENST00000612330 2296 ntBASIC16.75■□□□□ 0.27
TIMP1P01033 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 AC106820.2-201ENST00000563775 3264 ntBASIC16.74■□□□□ 0.27
TIMP1P01033 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
TIMP1P01033 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TIMP1P01033 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
TIMP1P01033 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.74■□□□□ 0.27
TIMP1P01033 AL136309.1-201ENST00000403917 691 ntBASIC16.74■□□□□ 0.27
TIMP1P01033 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TIMP1P01033 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.74■□□□□ 0.27
TIMP1P01033 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.74■□□□□ 0.27
TIMP1P01033 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.74■□□□□ 0.27
TIMP1P01033 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
TIMP1P01033 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.74■□□□□ 0.27
TIMP1P01033 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.74■□□□□ 0.27
TIMP1P01033 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
TIMP1P01033 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.74■□□□□ 0.27
TIMP1P01033 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.74■□□□□ 0.27
TIMP1P01033 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP1P01033 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TIMP1P01033 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TIMP1P01033 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TIMP1P01033 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 AC106886.4-201ENST00000623557 2502 ntBASIC16.73■□□□□ 0.27
TIMP1P01033 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP1P01033 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TIMP1P01033 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.73■□□□□ 0.27
TIMP1P01033 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.73■□□□□ 0.27
TIMP1P01033 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.73■□□□□ 0.27
TIMP1P01033 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP1P01033 AC006335.1-201ENST00000445200 547 ntBASIC16.73■□□□□ 0.27
TIMP1P01033 AC104073.2-201ENST00000453737 312 ntBASIC16.73■□□□□ 0.27
TIMP1P01033 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP1P01033 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TIMP1P01033 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.73■□□□□ 0.27
TIMP1P01033 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.73■□□□□ 0.27
TIMP1P01033 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.73■□□□□ 0.27
TIMP1P01033 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.73■□□□□ 0.27
TIMP1P01033 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP1P01033 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.73■□□□□ 0.27
TIMP1P01033 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP1P01033 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.73■□□□□ 0.27
TIMP1P01033 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP1P01033 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms