Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CNOT4O95628 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CNOT4O95628 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.06□□□□□ -0.16
CNOT4O95628 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.06□□□□□ -0.16
CNOT4O95628 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.06□□□□□ -0.16
CNOT4O95628 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.06□□□□□ -0.16
CNOT4O95628 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.06□□□□□ -0.16
CNOT4O95628 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.06□□□□□ -0.16
CNOT4O95628 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.06□□□□□ -0.16
CNOT4O95628 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.06□□□□□ -0.16
CNOT4O95628 AL513523.2-202ENST00000427283 2040 ntBASIC14.06□□□□□ -0.16
CNOT4O95628 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.06□□□□□ -0.16
CNOT4O95628 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.06□□□□□ -0.16
CNOT4O95628 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.06□□□□□ -0.16
CNOT4O95628 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.06□□□□□ -0.16
CNOT4O95628 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.06□□□□□ -0.16
CNOT4O95628 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNOT4O95628 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CNOT4O95628 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CNOT4O95628 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CNOT4O95628 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.05□□□□□ -0.16
CNOT4O95628 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.05□□□□□ -0.16
CNOT4O95628 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.05□□□□□ -0.16
CNOT4O95628 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.05□□□□□ -0.16
CNOT4O95628 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 MEP1AP4-201ENST00000423244 1087 ntBASIC14.05□□□□□ -0.16
CNOT4O95628 KRT17P7-201ENST00000451704 1104 ntBASIC14.05□□□□□ -0.16
CNOT4O95628 PHKG1P2-201ENST00000457537 863 ntBASIC14.05□□□□□ -0.16
CNOT4O95628 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 AC025048.3-201ENST00000590609 569 ntBASIC14.05□□□□□ -0.16
CNOT4O95628 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.05□□□□□ -0.16
CNOT4O95628 AC005702.4-201ENST00000618393 416 ntBASIC14.05□□□□□ -0.16
CNOT4O95628 MIR6752-201ENST00000618442 71 ntBASIC14.05□□□□□ -0.16
CNOT4O95628 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CNOT4O95628 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CNOT4O95628 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.05□□□□□ -0.16
CNOT4O95628 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNOT4O95628 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms