Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.75□□□□□ -0.21
UPK1BO75841 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
UPK1BO75841 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 AC023090.2-201ENST00000625182 2110 ntBASIC13.75□□□□□ -0.21
UPK1BO75841 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.75□□□□□ -0.21
UPK1BO75841 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UPK1BO75841 AC015818.8-201ENST00000587907 1519 ntBASIC13.74□□□□□ -0.21
UPK1BO75841 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK1BO75841 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
UPK1BO75841 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
UPK1BO75841 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
UPK1BO75841 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UPK1BO75841 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
UPK1BO75841 AC018529.2-202ENST00000611482 3087 ntBASIC13.74□□□□□ -0.21
UPK1BO75841 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.74□□□□□ -0.21
UPK1BO75841 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 SPDYE15P-201ENST00000424157 909 ntBASIC13.74□□□□□ -0.21
UPK1BO75841 PAWRP1-201ENST00000451083 565 ntBASIC13.74□□□□□ -0.21
UPK1BO75841 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 AC092597.1-201ENST00000487352 616 ntBASIC13.74□□□□□ -0.21
UPK1BO75841 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
UPK1BO75841 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK1BO75841 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.74□□□□□ -0.21
UPK1BO75841 AC104771.1-201ENST00000603335 964 ntBASIC13.74□□□□□ -0.21
UPK1BO75841 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK1BO75841 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
UPK1BO75841 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UPK1BO75841 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
UPK1BO75841 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.74□□□□□ -0.21
UPK1BO75841 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UPK1BO75841 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.74□□□□□ -0.21
UPK1BO75841 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK1BO75841 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UPK1BO75841 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
UPK1BO75841 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UPK1BO75841 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
UPK1BO75841 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.73□□□□□ -0.21
UPK1BO75841 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UPK1BO75841 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UPK1BO75841 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms