Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.77□□□□□ -0.04
TRIM3O75382 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRIM3O75382 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TRIM3O75382 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM3O75382 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.77□□□□□ -0.05
TRIM3O75382 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.77□□□□□ -0.05
TRIM3O75382 MTND6P24-201ENST00000440466 518 ntBASIC14.77□□□□□ -0.05
TRIM3O75382 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM3O75382 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.77□□□□□ -0.05
TRIM3O75382 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.77□□□□□ -0.05
TRIM3O75382 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.77□□□□□ -0.05
TRIM3O75382 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.77□□□□□ -0.05
TRIM3O75382 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.77□□□□□ -0.05
TRIM3O75382 AL390754.1-201ENST00000619088 582 ntBASIC14.77□□□□□ -0.05
TRIM3O75382 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRIM3O75382 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM3O75382 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM3O75382 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.77□□□□□ -0.05
TRIM3O75382 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM3O75382 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.77□□□□□ -0.05
TRIM3O75382 CETN4P-206ENST00000642099 2168 ntBASIC14.77□□□□□ -0.05
TRIM3O75382 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRIM3O75382 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM3O75382 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRIM3O75382 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.77□□□□□ -0.05
TRIM3O75382 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIM3O75382 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIM3O75382 REXO1L8P-201ENST00000604378 1897 ntBASIC14.76□□□□□ -0.05
TRIM3O75382 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRIM3O75382 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRIM3O75382 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
TRIM3O75382 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRIM3O75382 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
TRIM3O75382 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIM3O75382 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.76□□□□□ -0.05
TRIM3O75382 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.76□□□□□ -0.05
TRIM3O75382 AL589739.1-201ENST00000607720 493 ntBASIC14.76□□□□□ -0.05
TRIM3O75382 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.76□□□□□ -0.05
TRIM3O75382 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRIM3O75382 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.76□□□□□ -0.05
TRIM3O75382 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRIM3O75382 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.76□□□□□ -0.05
TRIM3O75382 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRIM3O75382 AC100757.3-201ENST00000622361 1406 ntBASIC14.75□□□□□ -0.05
TRIM3O75382 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TRIM3O75382 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRIM3O75382 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.75□□□□□ -0.05
TRIM3O75382 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.75□□□□□ -0.05
TRIM3O75382 AC241585.1-201ENST00000433527 519 ntBASIC14.75□□□□□ -0.05
TRIM3O75382 AL079307.3-201ENST00000556114 283 ntBASIC14.75□□□□□ -0.05
TRIM3O75382 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRIM3O75382 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.75□□□□□ -0.05
TRIM3O75382 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.75□□□□□ -0.05
TRIM3O75382 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms