Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL442647.2-201ENST00000429864 857 ntBASIC14.11□□□□□ -0.15
ZIC3O60481 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC3O60481 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC3O60481 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC3O60481 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC3O60481 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC3O60481 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC3O60481 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ZIC3O60481 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC3O60481 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.11□□□□□ -0.15
ZIC3O60481 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.11□□□□□ -0.15
ZIC3O60481 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZIC3O60481 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
ZIC3O60481 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.11□□□□□ -0.15
ZIC3O60481 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC3O60481 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.11□□□□□ -0.15
ZIC3O60481 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 WFDC1-204ENST00000613603 549 ntBASIC14.11□□□□□ -0.15
ZIC3O60481 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC3O60481 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.11□□□□□ -0.15
ZIC3O60481 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC3O60481 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC3O60481 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ZIC3O60481 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC3O60481 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.11□□□□□ -0.15
ZIC3O60481 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZIC3O60481 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
ZIC3O60481 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.1□□□□□ -0.15
ZIC3O60481 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZIC3O60481 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 PAUPAR-201ENST00000630360 2965 ntBASIC14.1□□□□□ -0.15
ZIC3O60481 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC3O60481 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.1□□□□□ -0.15
ZIC3O60481 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZIC3O60481 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.1□□□□□ -0.15
ZIC3O60481 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC3O60481 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ZIC3O60481 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
ZIC3O60481 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC3O60481 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC3O60481 AP006294.1-201ENST00000415407 339 ntBASIC14.1□□□□□ -0.15
ZIC3O60481 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.1□□□□□ -0.15
ZIC3O60481 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.1□□□□□ -0.15
ZIC3O60481 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.1□□□□□ -0.15
ZIC3O60481 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.1□□□□□ -0.15
ZIC3O60481 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.1□□□□□ -0.15
ZIC3O60481 CR383656.12-201ENST00000549567 513 ntBASIC14.1□□□□□ -0.15
ZIC3O60481 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.1□□□□□ -0.15
ZIC3O60481 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC3O60481 AC012645.4-201ENST00000610691 1061 ntBASIC14.1□□□□□ -0.15
ZIC3O60481 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.1□□□□□ -0.15
ZIC3O60481 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
ZIC3O60481 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZIC3O60481 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZIC3O60481 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.1□□□□□ -0.15
ZIC3O60481 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.1□□□□□ -0.15
ZIC3O60481 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC3O60481 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZIC3O60481 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.1□□□□□ -0.15
ZIC3O60481 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ZIC3O60481 AC090616.6-203ENST00000579186 1945 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms