Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MSI1O43347 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.33■□□□□ 0.2
MSI1O43347 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.32■□□□□ 0.2
MSI1O43347 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.32■□□□□ 0.2
MSI1O43347 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
MSI1O43347 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
MSI1O43347 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
MSI1O43347 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
MSI1O43347 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.32■□□□□ 0.2
MSI1O43347 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MSI1O43347 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.32■□□□□ 0.2
MSI1O43347 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.32■□□□□ 0.2
MSI1O43347 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.32■□□□□ 0.2
MSI1O43347 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
MSI1O43347 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
MSI1O43347 RN7SL692P-201ENST00000464677 288 ntBASIC16.32■□□□□ 0.2
MSI1O43347 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.32■□□□□ 0.2
MSI1O43347 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
MSI1O43347 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.32■□□□□ 0.2
MSI1O43347 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.32■□□□□ 0.2
MSI1O43347 AC036164.1-201ENST00000570544 333 ntBASIC16.32■□□□□ 0.2
MSI1O43347 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.32■□□□□ 0.2
MSI1O43347 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.32■□□□□ 0.2
MSI1O43347 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.32■□□□□ 0.2
MSI1O43347 AC093726.1-201ENST00000608064 963 ntBASIC16.32■□□□□ 0.2
MSI1O43347 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
MSI1O43347 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.32■□□□□ 0.2
MSI1O43347 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MSI1O43347 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.32■□□□□ 0.2
MSI1O43347 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MSI1O43347 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 AC138969.3-201ENST00000546612 1459 ntBASIC16.31■□□□□ 0.2
MSI1O43347 AC138932.2-201ENST00000548268 1459 ntBASIC16.31■□□□□ 0.2
MSI1O43347 AC126755.4-201ENST00000549796 1459 ntBASIC16.31■□□□□ 0.2
MSI1O43347 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MSI1O43347 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.31■□□□□ 0.2
MSI1O43347 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 RN7SL399P-201ENST00000471648 279 ntBASIC16.31■□□□□ 0.2
MSI1O43347 ELK1P1-201ENST00000485699 580 ntBASIC16.31■□□□□ 0.2
MSI1O43347 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.31■□□□□ 0.2
MSI1O43347 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.31■□□□□ 0.2
MSI1O43347 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 CTBP2P3-201ENST00000585629 1255 ntBASIC16.31■□□□□ 0.2
MSI1O43347 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.31■□□□□ 0.2
MSI1O43347 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.31■□□□□ 0.2
MSI1O43347 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.31■□□□□ 0.2
MSI1O43347 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.31■□□□□ 0.2
MSI1O43347 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MSI1O43347 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
MSI1O43347 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MSI1O43347 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MSI1O43347 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MSI1O43347 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms