Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
PAX4O43316 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
PAX4O43316 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PAX4O43316 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
PAX4O43316 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PAX4O43316 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.35□□□□□ -0.59
PAX4O43316 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC11.35□□□□□ -0.59
PAX4O43316 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
PAX4O43316 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.35□□□□□ -0.59
PAX4O43316 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
PAX4O43316 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PAX4O43316 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
PAX4O43316 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
PAX4O43316 AP003680.1-201ENST00000598970 3660 ntBASIC11.34□□□□□ -0.59
PAX4O43316 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.34□□□□□ -0.59
PAX4O43316 AP001282.1-201ENST00000531301 1499 ntBASIC11.34□□□□□ -0.59
PAX4O43316 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.34□□□□□ -0.59
PAX4O43316 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.34□□□□□ -0.59
PAX4O43316 Z97985.1-201ENST00000332270 946 ntBASIC11.34□□□□□ -0.59
PAX4O43316 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.34□□□□□ -0.59
PAX4O43316 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC11.34□□□□□ -0.59
PAX4O43316 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.34□□□□□ -0.59
PAX4O43316 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 AL139010.1-201ENST00000454878 894 ntBASIC11.34□□□□□ -0.59
PAX4O43316 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.34□□□□□ -0.59
PAX4O43316 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.34□□□□□ -0.59
PAX4O43316 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC11.34□□□□□ -0.59
PAX4O43316 AC093520.2-201ENST00000561830 333 ntBASIC11.34□□□□□ -0.59
PAX4O43316 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.34□□□□□ -0.59
PAX4O43316 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
PAX4O43316 AC018529.1-201ENST00000613063 361 ntBASIC11.34□□□□□ -0.59
PAX4O43316 MIR6080-201ENST00000617359 66 ntBASIC11.34□□□□□ -0.59
PAX4O43316 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.34□□□□□ -0.59
PAX4O43316 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
PAX4O43316 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
PAX4O43316 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.34□□□□□ -0.59
PAX4O43316 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
PAX4O43316 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
PAX4O43316 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
PAX4O43316 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
PAX4O43316 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
PAX4O43316 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PAX4O43316 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PAX4O43316 LINC02447-202ENST00000501888 2146 ntBASIC11.33□□□□□ -0.6
PAX4O43316 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.33□□□□□ -0.6
PAX4O43316 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PAX4O43316 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PAX4O43316 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.33□□□□□ -0.6
PAX4O43316 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.33□□□□□ -0.6
PAX4O43316 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
PAX4O43316 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
PAX4O43316 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms