Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.81■□□□□ 0.6
SEMA3EO15041 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.81■□□□□ 0.6
SEMA3EO15041 AC016694.1-201ENST00000434179 700 ntBASIC18.81■□□□□ 0.6
SEMA3EO15041 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 FO681548.1-201ENST00000455617 1132 ntBASIC18.81■□□□□ 0.6
SEMA3EO15041 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.81■□□□□ 0.6
SEMA3EO15041 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC18.81■□□□□ 0.6
SEMA3EO15041 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.81■□□□□ 0.6
SEMA3EO15041 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SEMA3EO15041 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SEMA3EO15041 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
SEMA3EO15041 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.81■□□□□ 0.6
SEMA3EO15041 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.81■□□□□ 0.6
SEMA3EO15041 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SEMA3EO15041 AC084364.1-201ENST00000551967 1556 ntBASIC18.81■□□□□ 0.6
SEMA3EO15041 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SEMA3EO15041 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA3EO15041 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SEMA3EO15041 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3EO15041 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3EO15041 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3EO15041 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.8■□□□□ 0.6
SEMA3EO15041 AC127383.1-201ENST00000444697 1800 ntBASIC18.8■□□□□ 0.6
SEMA3EO15041 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3EO15041 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SEMA3EO15041 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA3EO15041 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.8■□□□□ 0.6
SEMA3EO15041 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SEMA3EO15041 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.8■□□□□ 0.6
SEMA3EO15041 FTH1P14-201ENST00000482930 551 ntBASIC18.8■□□□□ 0.6
SEMA3EO15041 KRT18P25-201ENST00000508931 1278 ntBASIC18.8■□□□□ 0.6
SEMA3EO15041 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.8■□□□□ 0.6
SEMA3EO15041 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
SEMA3EO15041 GNRHR2-203ENST00000581100 1187 ntBASIC18.8■□□□□ 0.6
SEMA3EO15041 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.8■□□□□ 0.6
SEMA3EO15041 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.8■□□□□ 0.6
SEMA3EO15041 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEMA3EO15041 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.8■□□□□ 0.6
SEMA3EO15041 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SEMA3EO15041 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SEMA3EO15041 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SEMA3EO15041 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA3EO15041 AC093525.8-201ENST00000624099 1342 ntBASIC18.79■□□□□ 0.6
SEMA3EO15041 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.79■□□□□ 0.6
SEMA3EO15041 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SEMA3EO15041 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 NUS1P3-201ENST00000423502 862 ntBASIC18.79■□□□□ 0.6
SEMA3EO15041 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SEMA3EO15041 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA3EO15041 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA3EO15041 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SEMA3EO15041 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SEMA3EO15041 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SEMA3EO15041 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA3EO15041 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SEMA3EO15041 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.79■□□□□ 0.6
SEMA3EO15041 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEMA3EO15041 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3EO15041 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA3EO15041 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3EO15041 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA3EO15041 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3EO15041 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3EO15041 AC010491.1-201ENST00000563101 2797 ntBASIC18.78■□□□□ 0.6
SEMA3EO15041 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3EO15041 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA3EO15041 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3EO15041 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SEMA3EO15041 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
SEMA3EO15041 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.78■□□□□ 0.6
SEMA3EO15041 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms