Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CUX2O14529 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC26.27■■□□□ 1.8
CUX2O14529 CTSL-202ENST00000342020 933 ntTSL 2 BASIC26.27■■□□□ 1.8
CUX2O14529 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CUX2O14529 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CUX2O14529 POU5F1P2-201ENST00000521750 823 ntBASIC26.27■■□□□ 1.8
CUX2O14529 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC26.27■■□□□ 1.8
CUX2O14529 AC026803.1-201ENST00000569130 274 ntBASIC26.27■■□□□ 1.8
CUX2O14529 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CUX2O14529 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC26.27■■□□□ 1.8
CUX2O14529 TP53-221ENST00000615910 1149 ntTSL 5 BASIC26.27■■□□□ 1.8
CUX2O14529 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
CUX2O14529 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CUX2O14529 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC26.27■■□□□ 1.8
CUX2O14529 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC26.27■■□□□ 1.8
CUX2O14529 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC26.27■■□□□ 1.8
CUX2O14529 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CUX2O14529 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC26.27■■□□□ 1.8
CUX2O14529 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CUX2O14529 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CUX2O14529 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CUX2O14529 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
CUX2O14529 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
CUX2O14529 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CUX2O14529 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC26.26■■□□□ 1.79
CUX2O14529 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CUX2O14529 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CUX2O14529 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC26.26■■□□□ 1.79
CUX2O14529 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CUX2O14529 RPL8P2-201ENST00000430538 502 ntBASIC26.26■■□□□ 1.79
CUX2O14529 GCSHP3-201ENST00000431120 391 ntBASIC26.26■■□□□ 1.79
CUX2O14529 AL645933.1-201ENST00000440087 609 ntBASIC26.26■■□□□ 1.79
CUX2O14529 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CUX2O14529 AC025262.2-201ENST00000623975 1056 ntBASIC26.26■■□□□ 1.79
CUX2O14529 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CUX2O14529 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC26.26■■□□□ 1.79
CUX2O14529 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CUX2O14529 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
CUX2O14529 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CUX2O14529 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CUX2O14529 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CUX2O14529 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CUX2O14529 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CUX2O14529 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
CUX2O14529 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CUX2O14529 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC26.25■■□□□ 1.79
CUX2O14529 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC26.25■■□□□ 1.79
CUX2O14529 KRT17P4-201ENST00000429445 819 ntBASIC26.25■■□□□ 1.79
CUX2O14529 CHCHD2P9-201ENST00000461726 456 ntBASIC26.25■■□□□ 1.79
CUX2O14529 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC26.25■■□□□ 1.79
CUX2O14529 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC26.25■■□□□ 1.79
CUX2O14529 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CUX2O14529 AL450472.2-201ENST00000603663 1156 ntBASIC26.25■■□□□ 1.79
CUX2O14529 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
CUX2O14529 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC26.25■■□□□ 1.79
CUX2O14529 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC26.25■■□□□ 1.79
CUX2O14529 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CUX2O14529 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC26.25■■□□□ 1.79
CUX2O14529 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CUX2O14529 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CUX2O14529 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
CUX2O14529 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CUX2O14529 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CUX2O14529 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CUX2O14529 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC26.25■■□□□ 1.79
CUX2O14529 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
CUX2O14529 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CUX2O14529 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CUX2O14529 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CUX2O14529 AC244197.1-201ENST00000456494 951 ntBASIC26.24■■□□□ 1.79
CUX2O14529 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC26.24■■□□□ 1.79
CUX2O14529 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CUX2O14529 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC26.24■■□□□ 1.79
CUX2O14529 MIR4472-1-201ENST00000584349 80 ntBASIC26.24■■□□□ 1.79
CUX2O14529 AC004686.1-201ENST00000605113 538 ntBASIC26.24■■□□□ 1.79
CUX2O14529 AP001094.4-201ENST00000579008 2176 ntBASIC26.24■■□□□ 1.79
CUX2O14529 ENPP7P8-202ENST00000527856 1345 ntBASIC26.24■■□□□ 1.79
CUX2O14529 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CUX2O14529 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC26.24■■□□□ 1.79
CUX2O14529 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC26.24■■□□□ 1.79
CUX2O14529 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CUX2O14529 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CUX2O14529 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CUX2O14529 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CUX2O14529 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CUX2O14529 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CUX2O14529 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC26.23■■□□□ 1.79
CUX2O14529 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CUX2O14529 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC26.23■■□□□ 1.79
CUX2O14529 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CUX2O14529 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC26.23■■□□□ 1.79
CUX2O14529 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC26.23■■□□□ 1.79
CUX2O14529 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC26.23■■□□□ 1.79
CUX2O14529 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC26.23■■□□□ 1.79
CUX2O14529 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CUX2O14529 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC26.23■■□□□ 1.79
CUX2O14529 AC021016.3-201ENST00000608367 477 ntBASIC26.23■■□□□ 1.79
CUX2O14529 MEG3_2.1-201ENST00000611456 105 ntBASIC26.23■■□□□ 1.79
CUX2O14529 AC002472.4-201ENST00000641915 272 ntBASIC26.23■■□□□ 1.79
CUX2O14529 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms