Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SOX1O00570 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.49■□□□□ 0.23
SOX1O00570 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SOX1O00570 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SOX1O00570 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
SOX1O00570 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.49■□□□□ 0.23
SOX1O00570 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SOX1O00570 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.49■□□□□ 0.23
SOX1O00570 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.49■□□□□ 0.23
SOX1O00570 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SOX1O00570 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.49■□□□□ 0.23
SOX1O00570 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.49■□□□□ 0.23
SOX1O00570 SERBP1P2-201ENST00000436888 1164 ntBASIC16.49■□□□□ 0.23
SOX1O00570 RPL18AP3-201ENST00000462885 528 ntBASIC16.49■□□□□ 0.23
SOX1O00570 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.49■□□□□ 0.23
SOX1O00570 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.49■□□□□ 0.23
SOX1O00570 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.49■□□□□ 0.23
SOX1O00570 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.49■□□□□ 0.23
SOX1O00570 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.49■□□□□ 0.23
SOX1O00570 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.49■□□□□ 0.23
SOX1O00570 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SOX1O00570 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.49■□□□□ 0.23
SOX1O00570 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SOX1O00570 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.49■□□□□ 0.23
SOX1O00570 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.49■□□□□ 0.23
SOX1O00570 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SOX1O00570 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
SOX1O00570 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
SOX1O00570 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 AC026471.1-201ENST00000564629 3026 ntBASIC16.48■□□□□ 0.23
SOX1O00570 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.48■□□□□ 0.23
SOX1O00570 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.48■□□□□ 0.23
SOX1O00570 PSMD4P1-201ENST00000433951 1109 ntBASIC16.48■□□□□ 0.23
SOX1O00570 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.48■□□□□ 0.23
SOX1O00570 AC024293.1-201ENST00000467930 498 ntBASIC16.48■□□□□ 0.23
SOX1O00570 RCC2P8-201ENST00000502779 1035 ntBASIC16.48■□□□□ 0.23
SOX1O00570 MIR4783-201ENST00000580343 82 ntBASIC16.48■□□□□ 0.23
SOX1O00570 MIR6816-201ENST00000620368 66 ntBASIC16.48■□□□□ 0.23
SOX1O00570 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.48■□□□□ 0.23
SOX1O00570 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SOX1O00570 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SOX1O00570 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.47■□□□□ 0.23
SOX1O00570 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SOX1O00570 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.47■□□□□ 0.23
SOX1O00570 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX1O00570 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SOX1O00570 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.47■□□□□ 0.23
SOX1O00570 GHSR-202ENST00000427970 912 ntBASIC16.47■□□□□ 0.23
SOX1O00570 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SOX1O00570 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.47■□□□□ 0.23
SOX1O00570 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SOX1O00570 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.47■□□□□ 0.23
SOX1O00570 SNORD3B-2-202ENST00000571722 791 ntBASIC16.47■□□□□ 0.23
SOX1O00570 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.47■□□□□ 0.23
SOX1O00570 AC097359.3-201ENST00000603982 1210 ntBASIC16.47■□□□□ 0.23
SOX1O00570 AC073911.3-201ENST00000624401 631 ntBASIC16.47■□□□□ 0.23
SOX1O00570 AC005332.8-201ENST00000622750 2735 ntBASIC16.47■□□□□ 0.23
SOX1O00570 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
SOX1O00570 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.47■□□□□ 0.23
SOX1O00570 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SOX1O00570 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SOX1O00570 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SOX1O00570 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms