Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 MIR4683-201ENST00000579659 81 ntBASIC17.58■□□□□ 0.41
LOC285556D6RIA3 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.58■□□□□ 0.41
LOC285556D6RIA3 AF254983.2-201ENST00000612331 135 ntBASIC17.58■□□□□ 0.41
LOC285556D6RIA3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LOC285556D6RIA3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.58■□□□□ 0.41
LOC285556D6RIA3 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.58■□□□□ 0.41
LOC285556D6RIA3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 AL662844.4-201ENST00000606367 2838 ntBASIC17.58■□□□□ 0.4
LOC285556D6RIA3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 MIR33B-201ENST00000385104 96 ntBASIC17.58■□□□□ 0.4
LOC285556D6RIA3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 AC009955.4-201ENST00000597192 544 ntBASIC17.58■□□□□ 0.4
LOC285556D6RIA3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LOC285556D6RIA3 REXO1L4P-201ENST00000605109 1937 ntBASIC17.57■□□□□ 0.4
LOC285556D6RIA3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 AC091046.1-201ENST00000331871 207 ntBASIC17.57■□□□□ 0.4
LOC285556D6RIA3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 RN7SL769P-201ENST00000469386 295 ntBASIC17.57■□□□□ 0.4
LOC285556D6RIA3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LOC285556D6RIA3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.56■□□□□ 0.4
LOC285556D6RIA3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 RN7SL720P-201ENST00000488178 304 ntBASIC17.56■□□□□ 0.4
LOC285556D6RIA3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 BNIP3P13-201ENST00000599968 566 ntBASIC17.56■□□□□ 0.4
LOC285556D6RIA3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.56■□□□□ 0.4
LOC285556D6RIA3 AC128714.1-201ENST00000637035 887 ntBASIC17.56■□□□□ 0.4
LOC285556D6RIA3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.56■□□□□ 0.4
LOC285556D6RIA3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms