Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NPIPB4C9JG80 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 AC103702.1-201ENST00000548801 2630 ntBASIC13.9□□□□□ -0.18
NPIPB4C9JG80 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 AC092580.3-201ENST00000430932 139 ntBASIC13.9□□□□□ -0.18
NPIPB4C9JG80 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NPIPB4C9JG80 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
NPIPB4C9JG80 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.9□□□□□ -0.19
NPIPB4C9JG80 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.9□□□□□ -0.19
NPIPB4C9JG80 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.9□□□□□ -0.19
NPIPB4C9JG80 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
NPIPB4C9JG80 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 KRT18P64-201ENST00000434946 1219 ntBASIC13.89□□□□□ -0.19
NPIPB4C9JG80 AC114501.2-201ENST00000439631 535 ntBASIC13.89□□□□□ -0.19
NPIPB4C9JG80 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 AC097493.3-201ENST00000509725 367 ntBASIC13.89□□□□□ -0.19
NPIPB4C9JG80 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 LINC01115-203ENST00000606068 577 ntBASIC13.89□□□□□ -0.19
NPIPB4C9JG80 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 AL121723.1-201ENST00000445194 1519 ntBASIC13.89□□□□□ -0.19
NPIPB4C9JG80 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 AC100757.3-201ENST00000622361 1406 ntBASIC13.89□□□□□ -0.19
NPIPB4C9JG80 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.89□□□□□ -0.19
NPIPB4C9JG80 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms