Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SPCS1Q9Y6A9 FOXO3B-201ENST00000395675 1928 ntBASIC16.14■□□□□ 0.17
SPCS1Q9Y6A9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SPCS1Q9Y6A9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS1Q9Y6A9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.14■□□□□ 0.17
SPCS1Q9Y6A9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPCS1Q9Y6A9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SPCS1Q9Y6A9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.14■□□□□ 0.17
SPCS1Q9Y6A9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 AC010501.1-201ENST00000606270 1962 ntBASIC16.13■□□□□ 0.17
SPCS1Q9Y6A9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS1Q9Y6A9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
SPCS1Q9Y6A9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.12■□□□□ 0.17
SPCS1Q9Y6A9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS1Q9Y6A9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.12■□□□□ 0.17
SPCS1Q9Y6A9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS1Q9Y6A9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SPCS1Q9Y6A9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS1Q9Y6A9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SPCS1Q9Y6A9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC16.12■□□□□ 0.17
SPCS1Q9Y6A9 LINC00526-201ENST00000581067 1875 ntBASIC16.12■□□□□ 0.17
SPCS1Q9Y6A9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS1Q9Y6A9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.11■□□□□ 0.17
SPCS1Q9Y6A9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS1Q9Y6A9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS1Q9Y6A9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS1Q9Y6A9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS1Q9Y6A9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS1Q9Y6A9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SPCS1Q9Y6A9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 AC073130.3-201ENST00000624389 2278 ntBASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.1■□□□□ 0.17
SPCS1Q9Y6A9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 MVK-208ENST00000539696 608 ntTSL 5 BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.09■□□□□ 0.17
SPCS1Q9Y6A9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SPCS1Q9Y6A9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SPCS1Q9Y6A9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SPCS1Q9Y6A9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SPCS1Q9Y6A9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.07■□□□□ 0.16
SPCS1Q9Y6A9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.07■□□□□ 0.16
SPCS1Q9Y6A9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS1Q9Y6A9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS1Q9Y6A9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS1Q9Y6A9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS1Q9Y6A9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS1Q9Y6A9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS1Q9Y6A9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS1Q9Y6A9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS1Q9Y6A9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SPCS1Q9Y6A9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SPCS1Q9Y6A9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.06■□□□□ 0.16
SPCS1Q9Y6A9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.06■□□□□ 0.16
SPCS1Q9Y6A9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.06■□□□□ 0.16
SPCS1Q9Y6A9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SPCS1Q9Y6A9 AL391422.3-201ENST00000603791 2761 ntBASIC16.06■□□□□ 0.16
SPCS1Q9Y6A9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms