Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PCDHA2Q9Y5H9 AC021242.3-201ENST00000607598 1377 ntBASIC26.27■■□□□ 1.8
PCDHA2Q9Y5H9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA2Q9Y5H9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA2Q9Y5H9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHA2Q9Y5H9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA2Q9Y5H9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA2Q9Y5H9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA2Q9Y5H9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PCDHA2Q9Y5H9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA2Q9Y5H9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PCDHA2Q9Y5H9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.26■■□□□ 1.79
PCDHA2Q9Y5H9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHA2Q9Y5H9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA2Q9Y5H9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHA2Q9Y5H9 AC142381.3-201ENST00000568208 1670 ntBASIC26.25■■□□□ 1.79
PCDHA2Q9Y5H9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA2Q9Y5H9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA2Q9Y5H9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.25■■□□□ 1.79
PCDHA2Q9Y5H9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
PCDHA2Q9Y5H9 MIR4281-201ENST00000580852 62 ntBASIC26.25■■□□□ 1.79
PCDHA2Q9Y5H9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHA2Q9Y5H9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.25■■□□□ 1.79
PCDHA2Q9Y5H9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA2Q9Y5H9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA2Q9Y5H9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.24■■□□□ 1.79
PCDHA2Q9Y5H9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.24■■□□□ 1.79
PCDHA2Q9Y5H9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA2Q9Y5H9 AC011551.1-201ENST00000614101 683 ntBASIC26.24■■□□□ 1.79
PCDHA2Q9Y5H9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.24■■□□□ 1.79
PCDHA2Q9Y5H9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
PCDHA2Q9Y5H9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHA2Q9Y5H9 AC138932.3-201ENST00000567634 1902 ntBASIC26.24■■□□□ 1.79
PCDHA2Q9Y5H9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 UNC93B8-201ENST00000511903 705 ntBASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.23■■□□□ 1.79
PCDHA2Q9Y5H9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA2Q9Y5H9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA2Q9Y5H9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.22■■□□□ 1.79
PCDHA2Q9Y5H9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA2Q9Y5H9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHA2Q9Y5H9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.22■■□□□ 1.79
PCDHA2Q9Y5H9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHA2Q9Y5H9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHA2Q9Y5H9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHA2Q9Y5H9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHA2Q9Y5H9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.2■■□□□ 1.79
PCDHA2Q9Y5H9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHA2Q9Y5H9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.2■■□□□ 1.79
PCDHA2Q9Y5H9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHA2Q9Y5H9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHA2Q9Y5H9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.2■■□□□ 1.78
PCDHA2Q9Y5H9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
PCDHA2Q9Y5H9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
PCDHA2Q9Y5H9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHA2Q9Y5H9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHA2Q9Y5H9 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
PCDHA2Q9Y5H9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.19■■□□□ 1.78
PCDHA2Q9Y5H9 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHA2Q9Y5H9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA2Q9Y5H9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA2Q9Y5H9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA2Q9Y5H9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHA2Q9Y5H9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA2Q9Y5H9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHA2Q9Y5H9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.18■■□□□ 1.78
PCDHA2Q9Y5H9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDHA2Q9Y5H9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
PCDHA2Q9Y5H9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA2Q9Y5H9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHA2Q9Y5H9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
PCDHA2Q9Y5H9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.17■■□□□ 1.78
PCDHA2Q9Y5H9 AC092028.1-203ENST00000608262 953 ntBASIC26.17■■□□□ 1.78
PCDHA2Q9Y5H9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA2Q9Y5H9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.16■■□□□ 1.78
PCDHA2Q9Y5H9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHA2Q9Y5H9 KRT16P3-201ENST00000439127 1283 ntBASIC26.16■■□□□ 1.78
PCDHA2Q9Y5H9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHA2Q9Y5H9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.16■■□□□ 1.78
PCDHA2Q9Y5H9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PCDHA2Q9Y5H9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA2Q9Y5H9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHA2Q9Y5H9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.15■■□□□ 1.78
PCDHA2Q9Y5H9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA2Q9Y5H9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA2Q9Y5H9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.15■■□□□ 1.78
PCDHA2Q9Y5H9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA2Q9Y5H9 FOXO3B-201ENST00000395675 1928 ntBASIC26.15■■□□□ 1.78
PCDHA2Q9Y5H9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PCDHA2Q9Y5H9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms