Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB1Q9Y5F3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PCDHB1Q9Y5F3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PCDHB1Q9Y5F3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.38■■□□□ 1.33
PCDHB1Q9Y5F3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.38■■□□□ 1.33
PCDHB1Q9Y5F3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDHB1Q9Y5F3 AP003733.4-201ENST00000623785 1697 ntBASIC23.38■■□□□ 1.33
PCDHB1Q9Y5F3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB1Q9Y5F3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDHB1Q9Y5F3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB1Q9Y5F3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.37■■□□□ 1.33
PCDHB1Q9Y5F3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB1Q9Y5F3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHB1Q9Y5F3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB1Q9Y5F3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.36■■□□□ 1.33
PCDHB1Q9Y5F3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB1Q9Y5F3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB1Q9Y5F3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHB1Q9Y5F3 FOXO3B-201ENST00000395675 1928 ntBASIC23.35■■□□□ 1.33
PCDHB1Q9Y5F3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PCDHB1Q9Y5F3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.35■■□□□ 1.33
PCDHB1Q9Y5F3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB1Q9Y5F3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHB1Q9Y5F3 LONRF2P2-201ENST00000439212 571 ntBASIC23.34■■□□□ 1.33
PCDHB1Q9Y5F3 Z92544.1-202ENST00000571933 1220 ntBASIC23.34■■□□□ 1.33
PCDHB1Q9Y5F3 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.34■■□□□ 1.33
PCDHB1Q9Y5F3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHB1Q9Y5F3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB1Q9Y5F3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB1Q9Y5F3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB1Q9Y5F3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHB1Q9Y5F3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB1Q9Y5F3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB1Q9Y5F3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHB1Q9Y5F3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB1Q9Y5F3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB1Q9Y5F3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB1Q9Y5F3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB1Q9Y5F3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHB1Q9Y5F3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB1Q9Y5F3 MIR6089-201ENST00000616698 64 ntBASIC23.32■■□□□ 1.32
PCDHB1Q9Y5F3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB1Q9Y5F3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB1Q9Y5F3 AC008406.3-201ENST00000620001 1374 ntBASIC23.31■■□□□ 1.32
PCDHB1Q9Y5F3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB1Q9Y5F3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB1Q9Y5F3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB1Q9Y5F3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PCDHB1Q9Y5F3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PCDHB1Q9Y5F3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHB1Q9Y5F3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHB1Q9Y5F3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB1Q9Y5F3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHB1Q9Y5F3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB1Q9Y5F3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
PCDHB1Q9Y5F3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB1Q9Y5F3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHB1Q9Y5F3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB1Q9Y5F3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
PCDHB1Q9Y5F3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.29■■□□□ 1.32
PCDHB1Q9Y5F3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB1Q9Y5F3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB1Q9Y5F3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
PCDHB1Q9Y5F3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB1Q9Y5F3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB1Q9Y5F3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB1Q9Y5F3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
PCDHB1Q9Y5F3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PCDHB1Q9Y5F3 MIR935-201ENST00000401179 91 ntBASIC23.28■■□□□ 1.32
PCDHB1Q9Y5F3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB1Q9Y5F3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB1Q9Y5F3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
PCDHB1Q9Y5F3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB1Q9Y5F3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHB1Q9Y5F3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB1Q9Y5F3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB1Q9Y5F3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB1Q9Y5F3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB1Q9Y5F3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PCDHB1Q9Y5F3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB1Q9Y5F3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB1Q9Y5F3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB1Q9Y5F3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB1Q9Y5F3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 KRT125P-201ENST00000546827 989 ntBASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 MIR4787-201ENST00000607364 84 ntBASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB1Q9Y5F3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHB1Q9Y5F3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHB1Q9Y5F3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.24■■□□□ 1.31
PCDHB1Q9Y5F3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHB1Q9Y5F3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms