Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
HHLA3Q9XRX5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
HHLA3Q9XRX5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HHLA3Q9XRX5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 AC026202.3-201ENST00000600805 1127 ntBASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HHLA3Q9XRX5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 AC133552.2-201ENST00000619106 1032 ntBASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 AC096887.2-201ENST00000623443 1957 ntBASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HHLA3Q9XRX5 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HHLA3Q9XRX5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 RAP2CP1-202ENST00000605179 643 ntBASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.92■□□□□ 0.3
HHLA3Q9XRX5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.91■□□□□ 0.3
HHLA3Q9XRX5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HHLA3Q9XRX5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.91■□□□□ 0.3
HHLA3Q9XRX5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HHLA3Q9XRX5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HHLA3Q9XRX5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HHLA3Q9XRX5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.91■□□□□ 0.3
HHLA3Q9XRX5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HHLA3Q9XRX5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HHLA3Q9XRX5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HHLA3Q9XRX5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HHLA3Q9XRX5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HHLA3Q9XRX5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HHLA3Q9XRX5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.9■□□□□ 0.3
HHLA3Q9XRX5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HHLA3Q9XRX5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HHLA3Q9XRX5 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HHLA3Q9XRX5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.9■□□□□ 0.3
HHLA3Q9XRX5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HHLA3Q9XRX5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HHLA3Q9XRX5 AC009831.1-201ENST00000580420 1582 ntBASIC16.89■□□□□ 0.3
HHLA3Q9XRX5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HHLA3Q9XRX5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HHLA3Q9XRX5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HHLA3Q9XRX5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HHLA3Q9XRX5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HHLA3Q9XRX5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HHLA3Q9XRX5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
HHLA3Q9XRX5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HHLA3Q9XRX5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HHLA3Q9XRX5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HHLA3Q9XRX5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HHLA3Q9XRX5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.88■□□□□ 0.29
HHLA3Q9XRX5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HHLA3Q9XRX5 KRT18P10-201ENST00000388836 1287 ntBASIC16.88■□□□□ 0.29
HHLA3Q9XRX5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HHLA3Q9XRX5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HHLA3Q9XRX5 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.87■□□□□ 0.29
HHLA3Q9XRX5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HHLA3Q9XRX5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.87■□□□□ 0.29
HHLA3Q9XRX5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HHLA3Q9XRX5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HHLA3Q9XRX5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.87■□□□□ 0.29
HHLA3Q9XRX5 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HHLA3Q9XRX5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms