Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
COL20A1Q9P218 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL20A1Q9P218 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
COL20A1Q9P218 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL20A1Q9P218 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL20A1Q9P218 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.68■■□□□ 1.86
COL20A1Q9P218 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL20A1Q9P218 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.68■■□□□ 1.86
COL20A1Q9P218 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.68■■□□□ 1.86
COL20A1Q9P218 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.68■■□□□ 1.86
COL20A1Q9P218 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.68■■□□□ 1.86
COL20A1Q9P218 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL20A1Q9P218 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.68■■□□□ 1.86
COL20A1Q9P218 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL20A1Q9P218 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.67■■□□□ 1.86
COL20A1Q9P218 AC010997.5-201ENST00000609182 354 ntBASIC26.67■■□□□ 1.86
COL20A1Q9P218 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.67■■□□□ 1.86
COL20A1Q9P218 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL20A1Q9P218 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL20A1Q9P218 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL20A1Q9P218 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL20A1Q9P218 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC26.65■■□□□ 1.86
COL20A1Q9P218 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.65■■□□□ 1.86
COL20A1Q9P218 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL20A1Q9P218 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
COL20A1Q9P218 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL20A1Q9P218 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL20A1Q9P218 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.64■■□□□ 1.86
COL20A1Q9P218 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.64■■□□□ 1.86
COL20A1Q9P218 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.64■■□□□ 1.86
COL20A1Q9P218 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.64■■□□□ 1.86
COL20A1Q9P218 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL20A1Q9P218 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
COL20A1Q9P218 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL20A1Q9P218 MTDHP2-201ENST00000601468 714 ntBASIC26.63■■□□□ 1.85
COL20A1Q9P218 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL20A1Q9P218 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
COL20A1Q9P218 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL20A1Q9P218 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.62■■□□□ 1.85
COL20A1Q9P218 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
COL20A1Q9P218 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL20A1Q9P218 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
COL20A1Q9P218 SNX5-217ENST00000606557 1087 ntBASIC26.61■■□□□ 1.85
COL20A1Q9P218 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL20A1Q9P218 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.6■■□□□ 1.85
COL20A1Q9P218 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.6■■□□□ 1.85
COL20A1Q9P218 AL117332.1-201ENST00000622628 974 ntBASIC26.6■■□□□ 1.85
COL20A1Q9P218 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
COL20A1Q9P218 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL20A1Q9P218 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL20A1Q9P218 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL20A1Q9P218 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.59■■□□□ 1.85
COL20A1Q9P218 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.58■■□□□ 1.85
COL20A1Q9P218 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.58■■□□□ 1.85
COL20A1Q9P218 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.58■■□□□ 1.85
COL20A1Q9P218 MIR6724-1-201ENST00000616420 92 ntBASIC26.58■■□□□ 1.85
COL20A1Q9P218 MIR6724-2-201ENST00000616483 92 ntBASIC26.58■■□□□ 1.85
COL20A1Q9P218 MIR6724-4-201ENST00000617390 92 ntBASIC26.58■■□□□ 1.85
COL20A1Q9P218 MIR6724-3-201ENST00000622482 92 ntBASIC26.58■■□□□ 1.85
COL20A1Q9P218 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.58■■□□□ 1.85
COL20A1Q9P218 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.58■■□□□ 1.85
COL20A1Q9P218 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.57■■□□□ 1.84
COL20A1Q9P218 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.57■■□□□ 1.84
COL20A1Q9P218 AC008406.3-201ENST00000620001 1374 ntBASIC26.57■■□□□ 1.84
COL20A1Q9P218 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL20A1Q9P218 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
COL20A1Q9P218 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.56■■□□□ 1.84
COL20A1Q9P218 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.56■■□□□ 1.84
COL20A1Q9P218 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL20A1Q9P218 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.56■■□□□ 1.84
COL20A1Q9P218 AC131281.2-201ENST00000520478 145 ntBASIC26.56■■□□□ 1.84
COL20A1Q9P218 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.56■■□□□ 1.84
COL20A1Q9P218 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.56■■□□□ 1.84
COL20A1Q9P218 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL20A1Q9P218 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.55■■□□□ 1.84
COL20A1Q9P218 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL20A1Q9P218 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL20A1Q9P218 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.55■■□□□ 1.84
COL20A1Q9P218 MIR3621-201ENST00000580529 85 ntBASIC26.55■■□□□ 1.84
COL20A1Q9P218 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL20A1Q9P218 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL20A1Q9P218 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.54■■□□□ 1.84
COL20A1Q9P218 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL20A1Q9P218 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
COL20A1Q9P218 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.54■■□□□ 1.84
COL20A1Q9P218 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL20A1Q9P218 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.54■■□□□ 1.84
COL20A1Q9P218 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL20A1Q9P218 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL20A1Q9P218 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL20A1Q9P218 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL20A1Q9P218 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.53■■□□□ 1.84
COL20A1Q9P218 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.53■■□□□ 1.84
COL20A1Q9P218 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.53■■□□□ 1.84
COL20A1Q9P218 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.53■■□□□ 1.84
COL20A1Q9P218 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.53■■□□□ 1.84
COL20A1Q9P218 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.53■■□□□ 1.84
COL20A1Q9P218 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL20A1Q9P218 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL20A1Q9P218 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms