Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RLIMQ9NVW2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.71■■□□□ 1.07
RLIMQ9NVW2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RLIMQ9NVW2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RLIMQ9NVW2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RLIMQ9NVW2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RLIMQ9NVW2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
RLIMQ9NVW2 AL592293.1-201ENST00000502889 1188 ntBASIC21.7■■□□□ 1.06
RLIMQ9NVW2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RLIMQ9NVW2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RLIMQ9NVW2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RLIMQ9NVW2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RLIMQ9NVW2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RLIMQ9NVW2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RLIMQ9NVW2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RLIMQ9NVW2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RLIMQ9NVW2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.69■■□□□ 1.06
RLIMQ9NVW2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RLIMQ9NVW2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RLIMQ9NVW2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.68■■□□□ 1.06
RLIMQ9NVW2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RLIMQ9NVW2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RLIMQ9NVW2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RLIMQ9NVW2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.68■■□□□ 1.06
RLIMQ9NVW2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RLIMQ9NVW2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RLIMQ9NVW2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.67■■□□□ 1.06
RLIMQ9NVW2 KRT18P10-201ENST00000388836 1287 ntBASIC21.67■■□□□ 1.06
RLIMQ9NVW2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RLIMQ9NVW2 SPCS2P3-201ENST00000500401 656 ntBASIC21.67■■□□□ 1.06
RLIMQ9NVW2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.67■■□□□ 1.06
RLIMQ9NVW2 AC004812.2-201ENST00000611079 2094 ntBASIC21.67■■□□□ 1.06
RLIMQ9NVW2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.67■■□□□ 1.06
RLIMQ9NVW2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.67■■□□□ 1.06
RLIMQ9NVW2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RLIMQ9NVW2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RLIMQ9NVW2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RLIMQ9NVW2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RLIMQ9NVW2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RLIMQ9NVW2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RLIMQ9NVW2 FOXO3B-201ENST00000395675 1928 ntBASIC21.66■■□□□ 1.06
RLIMQ9NVW2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RLIMQ9NVW2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.66■■□□□ 1.06
RLIMQ9NVW2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 AC068473.5-201ENST00000616428 2072 ntBASIC21.65■■□□□ 1.06
RLIMQ9NVW2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RLIMQ9NVW2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
RLIMQ9NVW2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
RLIMQ9NVW2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RLIMQ9NVW2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.64■■□□□ 1.05
RLIMQ9NVW2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.64■■□□□ 1.05
RLIMQ9NVW2 U85056.1-201ENST00000616429 682 ntBASIC21.64■■□□□ 1.05
RLIMQ9NVW2 AC141586.4-201ENST00000624558 1573 ntBASIC21.64■■□□□ 1.05
RLIMQ9NVW2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
RLIMQ9NVW2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RLIMQ9NVW2 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RLIMQ9NVW2 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RLIMQ9NVW2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RLIMQ9NVW2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
RLIMQ9NVW2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RLIMQ9NVW2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RLIMQ9NVW2 AC018755.3-202ENST00000596210 929 ntBASIC21.63■■□□□ 1.05
RLIMQ9NVW2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RLIMQ9NVW2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RLIMQ9NVW2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.63■■□□□ 1.05
RLIMQ9NVW2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RLIMQ9NVW2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.62■■□□□ 1.05
RLIMQ9NVW2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.62■■□□□ 1.05
RLIMQ9NVW2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RLIMQ9NVW2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.62■■□□□ 1.05
RLIMQ9NVW2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RLIMQ9NVW2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.62■■□□□ 1.05
RLIMQ9NVW2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RLIMQ9NVW2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RLIMQ9NVW2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RLIMQ9NVW2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.61■■□□□ 1.05
RLIMQ9NVW2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RLIMQ9NVW2 AC012676.1-201ENST00000574705 1949 ntBASIC21.61■■□□□ 1.05
RLIMQ9NVW2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RLIMQ9NVW2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.61■■□□□ 1.05
RLIMQ9NVW2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RLIMQ9NVW2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RLIMQ9NVW2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RLIMQ9NVW2 MIR6089-201ENST00000616698 64 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms