Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB16Q9NRJ7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHB16Q9NRJ7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB16Q9NRJ7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PCDHB16Q9NRJ7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB16Q9NRJ7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB16Q9NRJ7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB16Q9NRJ7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB16Q9NRJ7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHB16Q9NRJ7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB16Q9NRJ7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB16Q9NRJ7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB16Q9NRJ7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB16Q9NRJ7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB16Q9NRJ7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB16Q9NRJ7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHB16Q9NRJ7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB16Q9NRJ7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB16Q9NRJ7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PCDHB16Q9NRJ7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB16Q9NRJ7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB16Q9NRJ7 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB16Q9NRJ7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PCDHB16Q9NRJ7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB16Q9NRJ7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB16Q9NRJ7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDHB16Q9NRJ7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHB16Q9NRJ7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHB16Q9NRJ7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDHB16Q9NRJ7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDHB16Q9NRJ7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB16Q9NRJ7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB16Q9NRJ7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB16Q9NRJ7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB16Q9NRJ7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHB16Q9NRJ7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHB16Q9NRJ7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB16Q9NRJ7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB16Q9NRJ7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
PCDHB16Q9NRJ7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHB16Q9NRJ7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHB16Q9NRJ7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 AC093536.1-201ENST00000569153 554 ntBASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHB16Q9NRJ7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB16Q9NRJ7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.04■□□□□ 0.8
PCDHB16Q9NRJ7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB16Q9NRJ7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB16Q9NRJ7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB16Q9NRJ7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB16Q9NRJ7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB16Q9NRJ7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHB16Q9NRJ7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDHB16Q9NRJ7 MIR6089-201ENST00000616698 64 ntBASIC20.03■□□□□ 0.8
PCDHB16Q9NRJ7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB16Q9NRJ7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB16Q9NRJ7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB16Q9NRJ7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB16Q9NRJ7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB16Q9NRJ7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB16Q9NRJ7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB16Q9NRJ7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHB16Q9NRJ7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHB16Q9NRJ7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
PCDHB16Q9NRJ7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB16Q9NRJ7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB16Q9NRJ7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PCDHB16Q9NRJ7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB16Q9NRJ7 AC007029.1-201ENST00000604183 313 ntBASIC20.01■□□□□ 0.79
PCDHB16Q9NRJ7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB16Q9NRJ7 AC068473.5-201ENST00000616428 2072 ntBASIC20.01■□□□□ 0.79
PCDHB16Q9NRJ7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB16Q9NRJ7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20■□□□□ 0.79
PCDHB16Q9NRJ7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20■□□□□ 0.79
PCDHB16Q9NRJ7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB16Q9NRJ7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB16Q9NRJ7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB16Q9NRJ7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms