Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VTA1Q9NP79 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VTA1Q9NP79 MIR935-201ENST00000401179 91 ntBASIC26.43■■□□□ 1.82
VTA1Q9NP79 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.43■■□□□ 1.82
VTA1Q9NP79 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.43■■□□□ 1.82
VTA1Q9NP79 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
VTA1Q9NP79 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
VTA1Q9NP79 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
VTA1Q9NP79 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
VTA1Q9NP79 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.42■■□□□ 1.82
VTA1Q9NP79 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.42■■□□□ 1.82
VTA1Q9NP79 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
VTA1Q9NP79 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VTA1Q9NP79 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VTA1Q9NP79 AC096631.2-201ENST00000436136 790 ntBASIC26.41■■□□□ 1.82
VTA1Q9NP79 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.41■■□□□ 1.82
VTA1Q9NP79 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.41■■□□□ 1.82
VTA1Q9NP79 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.41■■□□□ 1.82
VTA1Q9NP79 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VTA1Q9NP79 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.41■■□□□ 1.82
VTA1Q9NP79 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.4■■□□□ 1.82
VTA1Q9NP79 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.4■■□□□ 1.82
VTA1Q9NP79 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.4■■□□□ 1.82
VTA1Q9NP79 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VTA1Q9NP79 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VTA1Q9NP79 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VTA1Q9NP79 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.4■■□□□ 1.82
VTA1Q9NP79 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
VTA1Q9NP79 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VTA1Q9NP79 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VTA1Q9NP79 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
VTA1Q9NP79 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.38■■□□□ 1.81
VTA1Q9NP79 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
VTA1Q9NP79 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VTA1Q9NP79 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VTA1Q9NP79 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
VTA1Q9NP79 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VTA1Q9NP79 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.36■■□□□ 1.81
VTA1Q9NP79 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.36■■□□□ 1.81
VTA1Q9NP79 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VTA1Q9NP79 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VTA1Q9NP79 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
VTA1Q9NP79 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
VTA1Q9NP79 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
VTA1Q9NP79 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.35■■□□□ 1.81
VTA1Q9NP79 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
VTA1Q9NP79 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.35■■□□□ 1.81
VTA1Q9NP79 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.35■■□□□ 1.81
VTA1Q9NP79 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VTA1Q9NP79 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
VTA1Q9NP79 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VTA1Q9NP79 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.34■■□□□ 1.81
VTA1Q9NP79 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
VTA1Q9NP79 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VTA1Q9NP79 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VTA1Q9NP79 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.33■■□□□ 1.81
VTA1Q9NP79 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.33■■□□□ 1.81
VTA1Q9NP79 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
VTA1Q9NP79 AC133561.4-201ENST00000566112 224 ntBASIC26.33■■□□□ 1.81
VTA1Q9NP79 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC26.33■■□□□ 1.81
VTA1Q9NP79 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
VTA1Q9NP79 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
VTA1Q9NP79 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
VTA1Q9NP79 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
VTA1Q9NP79 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.32■■□□□ 1.8
VTA1Q9NP79 AC092803.2-201ENST00000564287 1899 ntBASIC26.32■■□□□ 1.8
VTA1Q9NP79 AC005837.3-201ENST00000612163 286 ntBASIC26.32■■□□□ 1.8
VTA1Q9NP79 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.32■■□□□ 1.8
VTA1Q9NP79 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.32■■□□□ 1.8
VTA1Q9NP79 AC004448.1-201ENST00000458332 883 ntBASIC26.31■■□□□ 1.8
VTA1Q9NP79 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
VTA1Q9NP79 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.31■■□□□ 1.8
VTA1Q9NP79 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.3■■□□□ 1.8
VTA1Q9NP79 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.3■■□□□ 1.8
VTA1Q9NP79 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
VTA1Q9NP79 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.3■■□□□ 1.8
VTA1Q9NP79 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.3■■□□□ 1.8
VTA1Q9NP79 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
VTA1Q9NP79 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VTA1Q9NP79 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VTA1Q9NP79 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.29■■□□□ 1.8
VTA1Q9NP79 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
VTA1Q9NP79 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VTA1Q9NP79 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.29■■□□□ 1.8
VTA1Q9NP79 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.29■■□□□ 1.8
VTA1Q9NP79 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
VTA1Q9NP79 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
VTA1Q9NP79 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
VTA1Q9NP79 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.28■■□□□ 1.8
VTA1Q9NP79 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
VTA1Q9NP79 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
VTA1Q9NP79 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
VTA1Q9NP79 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.28■■□□□ 1.8
VTA1Q9NP79 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
VTA1Q9NP79 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.28■■□□□ 1.8
VTA1Q9NP79 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
VTA1Q9NP79 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VTA1Q9NP79 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
VTA1Q9NP79 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VTA1Q9NP79 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms