Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP4-3Q9BYR4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP4-3Q9BYR4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP4-3Q9BYR4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP4-3Q9BYR4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 KRT18P10-201ENST00000388836 1287 ntBASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC7.97□□□□□ -1.13
KRTAP4-3Q9BYR4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
KRTAP4-3Q9BYR4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
KRTAP4-3Q9BYR4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
KRTAP4-3Q9BYR4 AC135731.1-201ENST00000569415 2548 ntBASIC7.96□□□□□ -1.13
KRTAP4-3Q9BYR4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
KRTAP4-3Q9BYR4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 RASSF1-AS1-201ENST00000629828 790 ntBASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC7.96□□□□□ -1.14
KRTAP4-3Q9BYR4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 DUSP8P4-201ENST00000399538 1761 ntBASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 AC131281.2-201ENST00000520478 145 ntBASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 AC010997.5-201ENST00000609182 354 ntBASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 AC008406.3-201ENST00000620001 1374 ntBASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 AC090877.2-201ENST00000558441 1738 ntBASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
KRTAP4-3Q9BYR4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 SRR-208ENST00000576848 588 ntTSL 4 BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 MIR4466-201ENST00000606121 54 ntBASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
KRTAP4-3Q9BYR4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms