Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.9■■□□□ 1.42
LRFN3Q9BTN0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRFN3Q9BTN0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
LRFN3Q9BTN0 AC011298.3-201ENST00000615796 283 ntBASIC23.89■■□□□ 1.41
LRFN3Q9BTN0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
LRFN3Q9BTN0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
LRFN3Q9BTN0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
LRFN3Q9BTN0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.88■■□□□ 1.41
LRFN3Q9BTN0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.88■■□□□ 1.41
LRFN3Q9BTN0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.88■■□□□ 1.41
LRFN3Q9BTN0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRFN3Q9BTN0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRFN3Q9BTN0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRFN3Q9BTN0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.87■■□□□ 1.41
LRFN3Q9BTN0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.87■■□□□ 1.41
LRFN3Q9BTN0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LRFN3Q9BTN0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRFN3Q9BTN0 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.86■■□□□ 1.41
LRFN3Q9BTN0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LRFN3Q9BTN0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.86■■□□□ 1.41
LRFN3Q9BTN0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRFN3Q9BTN0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.85■■□□□ 1.41
LRFN3Q9BTN0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.85■■□□□ 1.41
LRFN3Q9BTN0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRFN3Q9BTN0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.85■■□□□ 1.41
LRFN3Q9BTN0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.85■■□□□ 1.41
LRFN3Q9BTN0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRFN3Q9BTN0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.84■■□□□ 1.41
LRFN3Q9BTN0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRFN3Q9BTN0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRFN3Q9BTN0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.84■■□□□ 1.41
LRFN3Q9BTN0 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.84■■□□□ 1.41
LRFN3Q9BTN0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRFN3Q9BTN0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
LRFN3Q9BTN0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LRFN3Q9BTN0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.83■■□□□ 1.41
LRFN3Q9BTN0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.83■■□□□ 1.41
LRFN3Q9BTN0 AL138724.1-201ENST00000606771 1088 ntBASIC23.83■■□□□ 1.41
LRFN3Q9BTN0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
LRFN3Q9BTN0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
LRFN3Q9BTN0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
LRFN3Q9BTN0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRFN3Q9BTN0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LRFN3Q9BTN0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.82■■□□□ 1.4
LRFN3Q9BTN0 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.82■■□□□ 1.4
LRFN3Q9BTN0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.82■■□□□ 1.4
LRFN3Q9BTN0 NTF6G-201ENST00000591094 616 ntBASIC23.82■■□□□ 1.4
LRFN3Q9BTN0 AC104771.1-201ENST00000603335 964 ntBASIC23.82■■□□□ 1.4
LRFN3Q9BTN0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.82■■□□□ 1.4
LRFN3Q9BTN0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRFN3Q9BTN0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRFN3Q9BTN0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.81■■□□□ 1.4
LRFN3Q9BTN0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.81■■□□□ 1.4
LRFN3Q9BTN0 AC080038.1-201ENST00000611274 1154 ntBASIC23.81■■□□□ 1.4
LRFN3Q9BTN0 AC245100.8-202ENST00000629247 1058 ntBASIC23.81■■□□□ 1.4
LRFN3Q9BTN0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.81■■□□□ 1.4
LRFN3Q9BTN0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.81■■□□□ 1.4
LRFN3Q9BTN0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.8■■□□□ 1.4
LRFN3Q9BTN0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRFN3Q9BTN0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRFN3Q9BTN0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRFN3Q9BTN0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.8■■□□□ 1.4
LRFN3Q9BTN0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRFN3Q9BTN0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.8■■□□□ 1.4
LRFN3Q9BTN0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRFN3Q9BTN0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRFN3Q9BTN0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRFN3Q9BTN0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRFN3Q9BTN0 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.79■■□□□ 1.4
LRFN3Q9BTN0 AC123595.1-201ENST00000440769 1046 ntBASIC23.79■■□□□ 1.4
LRFN3Q9BTN0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.79■■□□□ 1.4
LRFN3Q9BTN0 AC233992.3-201ENST00000607491 485 ntBASIC23.79■■□□□ 1.4
LRFN3Q9BTN0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.79■■□□□ 1.4
LRFN3Q9BTN0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LRFN3Q9BTN0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRFN3Q9BTN0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRFN3Q9BTN0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.78■■□□□ 1.4
LRFN3Q9BTN0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.78■■□□□ 1.4
LRFN3Q9BTN0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
LRFN3Q9BTN0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRFN3Q9BTN0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.78■■□□□ 1.4
LRFN3Q9BTN0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
LRFN3Q9BTN0 AL355802.2-201ENST00000402069 882 ntBASIC23.77■■□□□ 1.4
LRFN3Q9BTN0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.77■■□□□ 1.4
LRFN3Q9BTN0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRFN3Q9BTN0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRFN3Q9BTN0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRFN3Q9BTN0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRFN3Q9BTN0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRFN3Q9BTN0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
LRFN3Q9BTN0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LRFN3Q9BTN0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.76■■□□□ 1.39
LRFN3Q9BTN0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.76■■□□□ 1.39
LRFN3Q9BTN0 AC099791.2-201ENST00000605725 427 ntBASIC23.76■■□□□ 1.39
LRFN3Q9BTN0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRFN3Q9BTN0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRFN3Q9BTN0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRFN3Q9BTN0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
LRFN3Q9BTN0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
LRFN3Q9BTN0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms