Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CITED4Q96RK1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
CITED4Q96RK1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CITED4Q96RK1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.76■□□□□ 0.75
CITED4Q96RK1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CITED4Q96RK1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CITED4Q96RK1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.75■□□□□ 0.75
CITED4Q96RK1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CITED4Q96RK1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CITED4Q96RK1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CITED4Q96RK1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.75■□□□□ 0.75
CITED4Q96RK1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CITED4Q96RK1 AC233723.2-201ENST00000623798 2106 ntBASIC19.75■□□□□ 0.75
CITED4Q96RK1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CITED4Q96RK1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.74■□□□□ 0.75
CITED4Q96RK1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CITED4Q96RK1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CITED4Q96RK1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CITED4Q96RK1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CITED4Q96RK1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CITED4Q96RK1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CITED4Q96RK1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.74■□□□□ 0.75
CITED4Q96RK1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CITED4Q96RK1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CITED4Q96RK1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CITED4Q96RK1 AL137060.1-201ENST00000618151 2648 ntBASIC19.73■□□□□ 0.75
CITED4Q96RK1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CITED4Q96RK1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CITED4Q96RK1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.73■□□□□ 0.75
CITED4Q96RK1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CITED4Q96RK1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CITED4Q96RK1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CITED4Q96RK1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.73■□□□□ 0.75
CITED4Q96RK1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CITED4Q96RK1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.73■□□□□ 0.75
CITED4Q96RK1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CITED4Q96RK1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CITED4Q96RK1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CITED4Q96RK1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CITED4Q96RK1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CITED4Q96RK1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CITED4Q96RK1 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.72■□□□□ 0.75
CITED4Q96RK1 AP004609.3-201ENST00000610705 1884 ntBASIC19.72■□□□□ 0.75
CITED4Q96RK1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.72■□□□□ 0.75
CITED4Q96RK1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CITED4Q96RK1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CITED4Q96RK1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CITED4Q96RK1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.71■□□□□ 0.75
CITED4Q96RK1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CITED4Q96RK1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CITED4Q96RK1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.71■□□□□ 0.75
CITED4Q96RK1 AC137767.1-201ENST00000602918 1920 ntBASIC19.71■□□□□ 0.75
CITED4Q96RK1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CITED4Q96RK1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CITED4Q96RK1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CITED4Q96RK1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CITED4Q96RK1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CITED4Q96RK1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CITED4Q96RK1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CITED4Q96RK1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CITED4Q96RK1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CITED4Q96RK1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CITED4Q96RK1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CITED4Q96RK1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.7■□□□□ 0.74
CITED4Q96RK1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.7■□□□□ 0.74
CITED4Q96RK1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.7■□□□□ 0.74
CITED4Q96RK1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CITED4Q96RK1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CITED4Q96RK1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CITED4Q96RK1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CITED4Q96RK1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CITED4Q96RK1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CITED4Q96RK1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CITED4Q96RK1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CITED4Q96RK1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CITED4Q96RK1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CITED4Q96RK1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CITED4Q96RK1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.69■□□□□ 0.74
CITED4Q96RK1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.69■□□□□ 0.74
CITED4Q96RK1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CITED4Q96RK1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CITED4Q96RK1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CITED4Q96RK1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.68■□□□□ 0.74
CITED4Q96RK1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CITED4Q96RK1 AP002414.2-202ENST00000590929 1450 ntBASIC19.68■□□□□ 0.74
CITED4Q96RK1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CITED4Q96RK1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.68■□□□□ 0.74
CITED4Q96RK1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CITED4Q96RK1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CITED4Q96RK1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CITED4Q96RK1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CITED4Q96RK1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CITED4Q96RK1 AC092667.1-201ENST00000434301 2586 ntBASIC19.68■□□□□ 0.74
CITED4Q96RK1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CITED4Q96RK1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CITED4Q96RK1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CITED4Q96RK1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CITED4Q96RK1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CITED4Q96RK1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.67■□□□□ 0.74
CITED4Q96RK1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms