Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GAFA1Q96PS6 KRT18P24-201ENST00000344739 1156 ntBASIC19.48■□□□□ 0.71
GAFA1Q96PS6 RARRES2P1-201ENST00000474487 481 ntBASIC19.48■□□□□ 0.71
GAFA1Q96PS6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
GAFA1Q96PS6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GAFA1Q96PS6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GAFA1Q96PS6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
GAFA1Q96PS6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GAFA1Q96PS6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
GAFA1Q96PS6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
GAFA1Q96PS6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.47■□□□□ 0.71
GAFA1Q96PS6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.47■□□□□ 0.71
GAFA1Q96PS6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.47■□□□□ 0.71
GAFA1Q96PS6 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GAFA1Q96PS6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GAFA1Q96PS6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.47■□□□□ 0.71
GAFA1Q96PS6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GAFA1Q96PS6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.47■□□□□ 0.71
GAFA1Q96PS6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.47■□□□□ 0.71
GAFA1Q96PS6 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.47■□□□□ 0.71
GAFA1Q96PS6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GAFA1Q96PS6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GAFA1Q96PS6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.46■□□□□ 0.71
GAFA1Q96PS6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GAFA1Q96PS6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GAFA1Q96PS6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GAFA1Q96PS6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
GAFA1Q96PS6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.45■□□□□ 0.7
GAFA1Q96PS6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
GAFA1Q96PS6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GAFA1Q96PS6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GAFA1Q96PS6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GAFA1Q96PS6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 AL031848.2-201ENST00000607670 837 ntBASIC19.44■□□□□ 0.7
GAFA1Q96PS6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GAFA1Q96PS6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GAFA1Q96PS6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GAFA1Q96PS6 MIR4281-201ENST00000580852 62 ntBASIC19.43■□□□□ 0.7
GAFA1Q96PS6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.43■□□□□ 0.7
GAFA1Q96PS6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GAFA1Q96PS6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GAFA1Q96PS6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GAFA1Q96PS6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GAFA1Q96PS6 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
GAFA1Q96PS6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.42■□□□□ 0.7
GAFA1Q96PS6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GAFA1Q96PS6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.42■□□□□ 0.7
GAFA1Q96PS6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GAFA1Q96PS6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GAFA1Q96PS6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GAFA1Q96PS6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.41■□□□□ 0.7
GAFA1Q96PS6 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.41■□□□□ 0.7
GAFA1Q96PS6 HLA-L-211ENST00000482052 1765 ntBASIC19.41■□□□□ 0.7
GAFA1Q96PS6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.41■□□□□ 0.7
GAFA1Q96PS6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GAFA1Q96PS6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GAFA1Q96PS6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
GAFA1Q96PS6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GAFA1Q96PS6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GAFA1Q96PS6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.4■□□□□ 0.7
GAFA1Q96PS6 AL139125.2-201ENST00000623134 1869 ntBASIC19.4■□□□□ 0.7
GAFA1Q96PS6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAFA1Q96PS6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GAFA1Q96PS6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.4■□□□□ 0.7
GAFA1Q96PS6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.4■□□□□ 0.7
GAFA1Q96PS6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GAFA1Q96PS6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GAFA1Q96PS6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GAFA1Q96PS6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAFA1Q96PS6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.39■□□□□ 0.69
GAFA1Q96PS6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAFA1Q96PS6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.39■□□□□ 0.69
GAFA1Q96PS6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAFA1Q96PS6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GAFA1Q96PS6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GAFA1Q96PS6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GAFA1Q96PS6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GAFA1Q96PS6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
GAFA1Q96PS6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAFA1Q96PS6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.37■□□□□ 0.69
GAFA1Q96PS6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.37■□□□□ 0.69
GAFA1Q96PS6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAFA1Q96PS6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GAFA1Q96PS6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAFA1Q96PS6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
GAFA1Q96PS6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GAFA1Q96PS6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
GAFA1Q96PS6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GAFA1Q96PS6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GAFA1Q96PS6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms