Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
ZSWIM3Q96MP5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
ZSWIM3Q96MP5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ZSWIM3Q96MP5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ZSWIM3Q96MP5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
ZSWIM3Q96MP5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.36■■□□□ 1.49
ZSWIM3Q96MP5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ZSWIM3Q96MP5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.36■■□□□ 1.49
ZSWIM3Q96MP5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.35■■□□□ 1.49
ZSWIM3Q96MP5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.35■■□□□ 1.49
ZSWIM3Q96MP5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZSWIM3Q96MP5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.35■■□□□ 1.49
ZSWIM3Q96MP5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZSWIM3Q96MP5 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ZSWIM3Q96MP5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
ZSWIM3Q96MP5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ZSWIM3Q96MP5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ZSWIM3Q96MP5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ZSWIM3Q96MP5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZSWIM3Q96MP5 AC005837.3-201ENST00000612163 286 ntBASIC24.34■■□□□ 1.49
ZSWIM3Q96MP5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.34■■□□□ 1.49
ZSWIM3Q96MP5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZSWIM3Q96MP5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZSWIM3Q96MP5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ZSWIM3Q96MP5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZSWIM3Q96MP5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.33■■□□□ 1.49
ZSWIM3Q96MP5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.33■■□□□ 1.49
ZSWIM3Q96MP5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.33■■□□□ 1.49
ZSWIM3Q96MP5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
ZSWIM3Q96MP5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ZSWIM3Q96MP5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.32■■□□□ 1.48
ZSWIM3Q96MP5 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZSWIM3Q96MP5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZSWIM3Q96MP5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZSWIM3Q96MP5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ZSWIM3Q96MP5 MIR6722-201ENST00000617286 78 ntBASIC24.31■■□□□ 1.48
ZSWIM3Q96MP5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.31■■□□□ 1.48
ZSWIM3Q96MP5 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZSWIM3Q96MP5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.31■■□□□ 1.48
ZSWIM3Q96MP5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZSWIM3Q96MP5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZSWIM3Q96MP5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
ZSWIM3Q96MP5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.3■■□□□ 1.48
ZSWIM3Q96MP5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.3■■□□□ 1.48
ZSWIM3Q96MP5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.3■■□□□ 1.48
ZSWIM3Q96MP5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZSWIM3Q96MP5 AC010501.1-201ENST00000606270 1962 ntBASIC24.29■■□□□ 1.48
ZSWIM3Q96MP5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.29■■□□□ 1.48
ZSWIM3Q96MP5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ZSWIM3Q96MP5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ZSWIM3Q96MP5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
ZSWIM3Q96MP5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ZSWIM3Q96MP5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
ZSWIM3Q96MP5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ZSWIM3Q96MP5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ZSWIM3Q96MP5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ZSWIM3Q96MP5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.29■■□□□ 1.48
ZSWIM3Q96MP5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
ZSWIM3Q96MP5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.28■■□□□ 1.48
ZSWIM3Q96MP5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ZSWIM3Q96MP5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ZSWIM3Q96MP5 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.28■■□□□ 1.48
ZSWIM3Q96MP5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.28■■□□□ 1.48
ZSWIM3Q96MP5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.28■■□□□ 1.48
ZSWIM3Q96MP5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.28■■□□□ 1.48
ZSWIM3Q96MP5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ZSWIM3Q96MP5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZSWIM3Q96MP5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.27■■□□□ 1.48
ZSWIM3Q96MP5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ZSWIM3Q96MP5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ZSWIM3Q96MP5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZSWIM3Q96MP5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ZSWIM3Q96MP5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.26■■□□□ 1.47
ZSWIM3Q96MP5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
ZSWIM3Q96MP5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.25■■□□□ 1.47
ZSWIM3Q96MP5 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.25■■□□□ 1.47
ZSWIM3Q96MP5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
ZSWIM3Q96MP5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ZSWIM3Q96MP5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.25■■□□□ 1.47
ZSWIM3Q96MP5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.25■■□□□ 1.47
ZSWIM3Q96MP5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.25■■□□□ 1.47
ZSWIM3Q96MP5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
ZSWIM3Q96MP5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ZSWIM3Q96MP5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.24■■□□□ 1.47
ZSWIM3Q96MP5 AC133561.4-201ENST00000566112 224 ntBASIC24.24■■□□□ 1.47
ZSWIM3Q96MP5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.24■■□□□ 1.47
ZSWIM3Q96MP5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZSWIM3Q96MP5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ZSWIM3Q96MP5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
ZSWIM3Q96MP5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.23■■□□□ 1.47
ZSWIM3Q96MP5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ZSWIM3Q96MP5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.23■■□□□ 1.47
ZSWIM3Q96MP5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
ZSWIM3Q96MP5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
ZSWIM3Q96MP5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZSWIM3Q96MP5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZSWIM3Q96MP5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZSWIM3Q96MP5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ZSWIM3Q96MP5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ZSWIM3Q96MP5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms