Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SYNE2Q8WXH0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
SYNE2Q8WXH0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC9.82□□□□□ -0.84
SYNE2Q8WXH0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SYNE2Q8WXH0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SYNE2Q8WXH0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC9.82□□□□□ -0.84
SYNE2Q8WXH0 DUX4L19-201ENST00000557448 1267 ntBASIC9.82□□□□□ -0.84
SYNE2Q8WXH0 MIR4497-201ENST00000583208 89 ntBASIC9.82□□□□□ -0.84
SYNE2Q8WXH0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SYNE2Q8WXH0 AC011551.1-201ENST00000614101 683 ntBASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 GUSBP6-202ENST00000438529 1198 ntBASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 AP006294.2-201ENST00000641667 209 ntBASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SYNE2Q8WXH0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 PRORSD1P-201ENST00000295112 541 ntBASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 AC233992.3-201ENST00000607491 485 ntBASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 KRT18P21-201ENST00000515767 1272 ntBASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 MIR4767-201ENST00000582827 78 ntBASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 WHAMMP3-201ENST00000611636 1609 ntBASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC9.8□□□□□ -0.84
SYNE2Q8WXH0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 AC087239.1-201ENST00000622671 572 ntBASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
SYNE2Q8WXH0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 KRT18P29-201ENST00000397031 1267 ntBASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 KRT18P61-201ENST00000585825 1298 ntBASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC9.78□□□□□ -0.84
SYNE2Q8WXH0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC9.77□□□□□ -0.84
SYNE2Q8WXH0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC9.77□□□□□ -0.84
SYNE2Q8WXH0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SYNE2Q8WXH0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC9.77□□□□□ -0.85
SYNE2Q8WXH0 AC136469.2-201ENST00000623944 1028 ntBASIC9.77□□□□□ -0.85
SYNE2Q8WXH0 POU5F1P3-201ENST00000428824 1078 ntBASIC9.77□□□□□ -0.85
SYNE2Q8WXH0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SYNE2Q8WXH0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms