Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NANOGP1Q8N7R0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
NANOGP1Q8N7R0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.83■□□□□ 0.93
NANOGP1Q8N7R0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.83■□□□□ 0.93
NANOGP1Q8N7R0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.83■□□□□ 0.92
NANOGP1Q8N7R0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGP1Q8N7R0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGP1Q8N7R0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.82■□□□□ 0.92
NANOGP1Q8N7R0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGP1Q8N7R0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGP1Q8N7R0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.82■□□□□ 0.92
NANOGP1Q8N7R0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.82■□□□□ 0.92
NANOGP1Q8N7R0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NANOGP1Q8N7R0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.82■□□□□ 0.92
NANOGP1Q8N7R0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.82■□□□□ 0.92
NANOGP1Q8N7R0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NANOGP1Q8N7R0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
NANOGP1Q8N7R0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGP1Q8N7R0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.81■□□□□ 0.92
NANOGP1Q8N7R0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NANOGP1Q8N7R0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGP1Q8N7R0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGP1Q8N7R0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGP1Q8N7R0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGP1Q8N7R0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGP1Q8N7R0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NANOGP1Q8N7R0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NANOGP1Q8N7R0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NANOGP1Q8N7R0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NANOGP1Q8N7R0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NANOGP1Q8N7R0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NANOGP1Q8N7R0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NANOGP1Q8N7R0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NANOGP1Q8N7R0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NANOGP1Q8N7R0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NANOGP1Q8N7R0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NANOGP1Q8N7R0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NANOGP1Q8N7R0 AC126177.7-201ENST00000547904 679 ntBASIC20.79■□□□□ 0.92
NANOGP1Q8N7R0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NANOGP1Q8N7R0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.79■□□□□ 0.92
NANOGP1Q8N7R0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
NANOGP1Q8N7R0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NANOGP1Q8N7R0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NANOGP1Q8N7R0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NANOGP1Q8N7R0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NANOGP1Q8N7R0 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.77■□□□□ 0.92
NANOGP1Q8N7R0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.77■□□□□ 0.92
NANOGP1Q8N7R0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NANOGP1Q8N7R0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.77■□□□□ 0.92
NANOGP1Q8N7R0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NANOGP1Q8N7R0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NANOGP1Q8N7R0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NANOGP1Q8N7R0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NANOGP1Q8N7R0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NANOGP1Q8N7R0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 DUX4L11-201ENST00000611504 1267 ntBASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 DUX4L12-201ENST00000614593 1267 ntBASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 DUX4L14-201ENST00000621227 1267 ntBASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 AC233723.2-201ENST00000623798 2106 ntBASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NANOGP1Q8N7R0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
NANOGP1Q8N7R0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NANOGP1Q8N7R0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NANOGP1Q8N7R0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.74■□□□□ 0.91
NANOGP1Q8N7R0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NANOGP1Q8N7R0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
NANOGP1Q8N7R0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NANOGP1Q8N7R0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NANOGP1Q8N7R0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NANOGP1Q8N7R0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
NANOGP1Q8N7R0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.73■□□□□ 0.91
NANOGP1Q8N7R0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NANOGP1Q8N7R0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NANOGP1Q8N7R0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NANOGP1Q8N7R0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NANOGP1Q8N7R0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NANOGP1Q8N7R0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NANOGP1Q8N7R0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NANOGP1Q8N7R0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NANOGP1Q8N7R0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NANOGP1Q8N7R0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NANOGP1Q8N7R0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NANOGP1Q8N7R0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms