Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 KRT18P10-201ENST00000388836 1287 ntBASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS13BQ7Z7G8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13BQ7Z7G8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13BQ7Z7G8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.62□□□□□ -0.07
VPS13BQ7Z7G8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13BQ7Z7G8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
VPS13BQ7Z7G8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13BQ7Z7G8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13BQ7Z7G8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS13BQ7Z7G8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
VPS13BQ7Z7G8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS13BQ7Z7G8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13BQ7Z7G8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.61□□□□□ -0.07
VPS13BQ7Z7G8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS13BQ7Z7G8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VPS13BQ7Z7G8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VPS13BQ7Z7G8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VPS13BQ7Z7G8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VPS13BQ7Z7G8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
VPS13BQ7Z7G8 AC096887.2-201ENST00000623443 1957 ntBASIC14.61□□□□□ -0.07
VPS13BQ7Z7G8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VPS13BQ7Z7G8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 EDA-201ENST00000338901 1233 ntBASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 AL136162.1-201ENST00000607711 1078 ntBASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 AF213884.3-201ENST00000563833 479 ntBASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 RASA4CP-201ENST00000424092 1398 ntBASIC14.59□□□□□ -0.07
VPS13BQ7Z7G8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VPS13BQ7Z7G8 AC142472.1-201ENST00000612013 1741 ntBASIC14.58□□□□□ -0.08
VPS13BQ7Z7G8 CA15P2-201ENST00000611168 834 ntBASIC14.58□□□□□ -0.08
VPS13BQ7Z7G8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VPS13BQ7Z7G8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS13BQ7Z7G8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS13BQ7Z7G8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VPS13BQ7Z7G8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
VPS13BQ7Z7G8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VPS13BQ7Z7G8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC14.58□□□□□ -0.08
VPS13BQ7Z7G8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 ERN1-208ENST00000606895 2068 ntBASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 SNX5-217ENST00000606557 1087 ntBASIC14.57□□□□□ -0.08
VPS13BQ7Z7G8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13BQ7Z7G8 AC034268.1-201ENST00000441047 882 ntBASIC14.56□□□□□ -0.08
VPS13BQ7Z7G8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
VPS13BQ7Z7G8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13BQ7Z7G8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13BQ7Z7G8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13BQ7Z7G8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS13BQ7Z7G8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13BQ7Z7G8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS13BQ7Z7G8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13BQ7Z7G8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13BQ7Z7G8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13BQ7Z7G8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13BQ7Z7G8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13BQ7Z7G8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS13BQ7Z7G8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS13BQ7Z7G8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13BQ7Z7G8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13BQ7Z7G8 FOXO3B-201ENST00000395675 1928 ntBASIC14.55□□□□□ -0.08
VPS13BQ7Z7G8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS13BQ7Z7G8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 203.8 ms