Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.5■■□□□ 1.67
CNKSR3Q6P9H4 AC024257.2-201ENST00000549699 147 ntBASIC25.5■■□□□ 1.67
CNKSR3Q6P9H4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.5■■□□□ 1.67
CNKSR3Q6P9H4 AL355001.2-201ENST00000620617 1191 ntBASIC25.5■■□□□ 1.67
CNKSR3Q6P9H4 AC142086.6-201ENST00000621154 1765 ntBASIC25.5■■□□□ 1.67
CNKSR3Q6P9H4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CNKSR3Q6P9H4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.49■■□□□ 1.67
CNKSR3Q6P9H4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.48■■□□□ 1.67
CNKSR3Q6P9H4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CNKSR3Q6P9H4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CNKSR3Q6P9H4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.48■■□□□ 1.67
CNKSR3Q6P9H4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CNKSR3Q6P9H4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CNKSR3Q6P9H4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.47■■□□□ 1.67
CNKSR3Q6P9H4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CNKSR3Q6P9H4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.47■■□□□ 1.67
CNKSR3Q6P9H4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CNKSR3Q6P9H4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CNKSR3Q6P9H4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CNKSR3Q6P9H4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CNKSR3Q6P9H4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CNKSR3Q6P9H4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CNKSR3Q6P9H4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.46■■□□□ 1.67
CNKSR3Q6P9H4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CNKSR3Q6P9H4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CNKSR3Q6P9H4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.45■■□□□ 1.67
CNKSR3Q6P9H4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CNKSR3Q6P9H4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
CNKSR3Q6P9H4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.45■■□□□ 1.66
CNKSR3Q6P9H4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CNKSR3Q6P9H4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.45■■□□□ 1.66
CNKSR3Q6P9H4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
CNKSR3Q6P9H4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CNKSR3Q6P9H4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.44■■□□□ 1.66
CNKSR3Q6P9H4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.44■■□□□ 1.66
CNKSR3Q6P9H4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CNKSR3Q6P9H4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CNKSR3Q6P9H4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
CNKSR3Q6P9H4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CNKSR3Q6P9H4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.43■■□□□ 1.66
CNKSR3Q6P9H4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
CNKSR3Q6P9H4 MIR5787-201ENST00000611784 55 ntBASIC25.43■■□□□ 1.66
CNKSR3Q6P9H4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
CNKSR3Q6P9H4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
CNKSR3Q6P9H4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.42■■□□□ 1.66
CNKSR3Q6P9H4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CNKSR3Q6P9H4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CNKSR3Q6P9H4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CNKSR3Q6P9H4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
CNKSR3Q6P9H4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
CNKSR3Q6P9H4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CNKSR3Q6P9H4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
CNKSR3Q6P9H4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.41■■□□□ 1.66
CNKSR3Q6P9H4 AC004448.1-201ENST00000458332 883 ntBASIC25.41■■□□□ 1.66
CNKSR3Q6P9H4 AC105265.2-201ENST00000467189 838 ntBASIC25.41■■□□□ 1.66
CNKSR3Q6P9H4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CNKSR3Q6P9H4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.41■■□□□ 1.66
CNKSR3Q6P9H4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CNKSR3Q6P9H4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.41■■□□□ 1.66
CNKSR3Q6P9H4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.41■■□□□ 1.66
CNKSR3Q6P9H4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.4■■□□□ 1.66
CNKSR3Q6P9H4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
CNKSR3Q6P9H4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CNKSR3Q6P9H4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CNKSR3Q6P9H4 DUX4L19-201ENST00000557448 1267 ntBASIC25.4■■□□□ 1.66
CNKSR3Q6P9H4 AC104564.3-201ENST00000582367 638 ntBASIC25.4■■□□□ 1.66
CNKSR3Q6P9H4 AL136967.2-201ENST00000623968 743 ntBASIC25.4■■□□□ 1.66
CNKSR3Q6P9H4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CNKSR3Q6P9H4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.4■■□□□ 1.66
CNKSR3Q6P9H4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.4■■□□□ 1.66
CNKSR3Q6P9H4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.4■■□□□ 1.66
CNKSR3Q6P9H4 AC097639.1-201ENST00000565519 1891 ntBASIC25.39■■□□□ 1.66
CNKSR3Q6P9H4 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.39■■□□□ 1.66
CNKSR3Q6P9H4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
CNKSR3Q6P9H4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CNKSR3Q6P9H4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CNKSR3Q6P9H4 AF213884.3-201ENST00000563833 479 ntBASIC25.38■■□□□ 1.65
CNKSR3Q6P9H4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CNKSR3Q6P9H4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CNKSR3Q6P9H4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CNKSR3Q6P9H4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CNKSR3Q6P9H4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.37■■□□□ 1.65
CNKSR3Q6P9H4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CNKSR3Q6P9H4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.37■■□□□ 1.65
CNKSR3Q6P9H4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.37■■□□□ 1.65
CNKSR3Q6P9H4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.37■■□□□ 1.65
CNKSR3Q6P9H4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CNKSR3Q6P9H4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CNKSR3Q6P9H4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CNKSR3Q6P9H4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
CNKSR3Q6P9H4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CNKSR3Q6P9H4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CNKSR3Q6P9H4 MIR939-201ENST00000401314 82 ntBASIC25.36■■□□□ 1.65
CNKSR3Q6P9H4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
CNKSR3Q6P9H4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CNKSR3Q6P9H4 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.36■■□□□ 1.65
CNKSR3Q6P9H4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CNKSR3Q6P9H4 AC005703.6-201ENST00000623265 1329 ntBASIC25.36■■□□□ 1.65
CNKSR3Q6P9H4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.35■■□□□ 1.65
CNKSR3Q6P9H4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms