Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.16■■□□□ 1.94
COL13A1Q5TAT6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.15■■□□□ 1.94
COL13A1Q5TAT6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.15■■□□□ 1.94
COL13A1Q5TAT6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL13A1Q5TAT6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
COL13A1Q5TAT6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
COL13A1Q5TAT6 AC011551.1-201ENST00000614101 683 ntBASIC27.14■■□□□ 1.94
COL13A1Q5TAT6 AC245100.8-202ENST00000629247 1058 ntBASIC27.14■■□□□ 1.94
COL13A1Q5TAT6 AC073111.5-205ENST00000641717 521 ntBASIC27.14■■□□□ 1.94
COL13A1Q5TAT6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
COL13A1Q5TAT6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
COL13A1Q5TAT6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
COL13A1Q5TAT6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
COL13A1Q5TAT6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
COL13A1Q5TAT6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
COL13A1Q5TAT6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL13A1Q5TAT6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL13A1Q5TAT6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC27.13■■□□□ 1.93
COL13A1Q5TAT6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL13A1Q5TAT6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC27.13■■□□□ 1.93
COL13A1Q5TAT6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
COL13A1Q5TAT6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
COL13A1Q5TAT6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL13A1Q5TAT6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.12■■□□□ 1.93
COL13A1Q5TAT6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC27.12■■□□□ 1.93
COL13A1Q5TAT6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.12■■□□□ 1.93
COL13A1Q5TAT6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC27.12■■□□□ 1.93
COL13A1Q5TAT6 AC092171.4-201ENST00000609130 632 ntBASIC27.12■■□□□ 1.93
COL13A1Q5TAT6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL13A1Q5TAT6 AL135925.1-201ENST00000605920 1701 ntBASIC27.11■■□□□ 1.93
COL13A1Q5TAT6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
COL13A1Q5TAT6 AC123595.1-201ENST00000440769 1046 ntBASIC27.11■■□□□ 1.93
COL13A1Q5TAT6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL13A1Q5TAT6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.11■■□□□ 1.93
COL13A1Q5TAT6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.11■■□□□ 1.93
COL13A1Q5TAT6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL13A1Q5TAT6 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.1■■□□□ 1.93
COL13A1Q5TAT6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.1■■□□□ 1.93
COL13A1Q5TAT6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL13A1Q5TAT6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL13A1Q5TAT6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.09■■□□□ 1.93
COL13A1Q5TAT6 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.09■■□□□ 1.93
COL13A1Q5TAT6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27.09■■□□□ 1.93
COL13A1Q5TAT6 AC008687.6-201ENST00000596318 630 ntBASIC27.09■■□□□ 1.93
COL13A1Q5TAT6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC27.08■■□□□ 1.93
COL13A1Q5TAT6 SNX5-217ENST00000606557 1087 ntBASIC27.08■■□□□ 1.93
COL13A1Q5TAT6 AC011298.3-201ENST00000615796 283 ntBASIC27.08■■□□□ 1.93
COL13A1Q5TAT6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.08■■□□□ 1.93
COL13A1Q5TAT6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL13A1Q5TAT6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL13A1Q5TAT6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC27.07■■□□□ 1.92
COL13A1Q5TAT6 PTCHD3P2-201ENST00000424937 1205 ntBASIC27.07■■□□□ 1.92
COL13A1Q5TAT6 CCDC92B-201ENST00000575506 885 ntBASIC27.07■■□□□ 1.92
COL13A1Q5TAT6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC27.07■■□□□ 1.92
COL13A1Q5TAT6 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.07■■□□□ 1.92
COL13A1Q5TAT6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL13A1Q5TAT6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL13A1Q5TAT6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL13A1Q5TAT6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL13A1Q5TAT6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL13A1Q5TAT6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL13A1Q5TAT6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL13A1Q5TAT6 APTR-205ENST00000447009 902 ntTSL 2 BASIC27.06■■□□□ 1.92
COL13A1Q5TAT6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC27.06■■□□□ 1.92
COL13A1Q5TAT6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC27.06■■□□□ 1.92
COL13A1Q5TAT6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL13A1Q5TAT6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.05■■□□□ 1.92
COL13A1Q5TAT6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC27.05■■□□□ 1.92
COL13A1Q5TAT6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL13A1Q5TAT6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
COL13A1Q5TAT6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
COL13A1Q5TAT6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL13A1Q5TAT6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.04■■□□□ 1.92
COL13A1Q5TAT6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
COL13A1Q5TAT6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
COL13A1Q5TAT6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
COL13A1Q5TAT6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL13A1Q5TAT6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
COL13A1Q5TAT6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.03■■□□□ 1.92
COL13A1Q5TAT6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC27.03■■□□□ 1.92
COL13A1Q5TAT6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL13A1Q5TAT6 MIR4651-201ENST00000582622 73 ntBASIC27.03■■□□□ 1.92
COL13A1Q5TAT6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC27.03■■□□□ 1.92
COL13A1Q5TAT6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.03■■□□□ 1.92
COL13A1Q5TAT6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL13A1Q5TAT6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
COL13A1Q5TAT6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.02■■□□□ 1.92
COL13A1Q5TAT6 AC027612.3-201ENST00000413684 1047 ntBASIC27.02■■□□□ 1.92
COL13A1Q5TAT6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC27.02■■□□□ 1.92
COL13A1Q5TAT6 AC087239.1-201ENST00000622671 572 ntBASIC27.02■■□□□ 1.92
COL13A1Q5TAT6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL13A1Q5TAT6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL13A1Q5TAT6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
COL13A1Q5TAT6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
COL13A1Q5TAT6 AC006970.2-201ENST00000450065 779 ntBASIC27.01■■□□□ 1.91
COL13A1Q5TAT6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.01■■□□□ 1.91
COL13A1Q5TAT6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC27.01■■□□□ 1.91
COL13A1Q5TAT6 AC233992.3-201ENST00000607491 485 ntBASIC27.01■■□□□ 1.91
COL13A1Q5TAT6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27■■□□□ 1.91
COL13A1Q5TAT6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms