Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CHRFAM7AQ494W8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CHRFAM7AQ494W8 AC008406.3-201ENST00000620001 1374 ntBASIC20.22■□□□□ 0.83
CHRFAM7AQ494W8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.22■□□□□ 0.83
CHRFAM7AQ494W8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRFAM7AQ494W8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.22■□□□□ 0.83
CHRFAM7AQ494W8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.22■□□□□ 0.83
CHRFAM7AQ494W8 AC103724.3-201ENST00000564481 992 ntBASIC20.22■□□□□ 0.83
CHRFAM7AQ494W8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CHRFAM7AQ494W8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CHRFAM7AQ494W8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.21■□□□□ 0.83
CHRFAM7AQ494W8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRFAM7AQ494W8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRFAM7AQ494W8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.21■□□□□ 0.83
CHRFAM7AQ494W8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CHRFAM7AQ494W8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CHRFAM7AQ494W8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.21■□□□□ 0.83
CHRFAM7AQ494W8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRFAM7AQ494W8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CHRFAM7AQ494W8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CHRFAM7AQ494W8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHRFAM7AQ494W8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.19■□□□□ 0.82
CHRFAM7AQ494W8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.19■□□□□ 0.82
CHRFAM7AQ494W8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.19■□□□□ 0.82
CHRFAM7AQ494W8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRFAM7AQ494W8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRFAM7AQ494W8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHRFAM7AQ494W8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHRFAM7AQ494W8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHRFAM7AQ494W8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 AC239859.2-201ENST00000444165 318 ntBASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHRFAM7AQ494W8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.16■□□□□ 0.82
CHRFAM7AQ494W8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRFAM7AQ494W8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRFAM7AQ494W8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRFAM7AQ494W8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CHRFAM7AQ494W8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRFAM7AQ494W8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRFAM7AQ494W8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRFAM7AQ494W8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRFAM7AQ494W8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHRFAM7AQ494W8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHRFAM7AQ494W8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CHRFAM7AQ494W8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHRFAM7AQ494W8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CHRFAM7AQ494W8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
CHRFAM7AQ494W8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRFAM7AQ494W8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.14■□□□□ 0.81
CHRFAM7AQ494W8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRFAM7AQ494W8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.14■□□□□ 0.81
CHRFAM7AQ494W8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.14■□□□□ 0.81
CHRFAM7AQ494W8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.14■□□□□ 0.81
CHRFAM7AQ494W8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.14■□□□□ 0.81
CHRFAM7AQ494W8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRFAM7AQ494W8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRFAM7AQ494W8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHRFAM7AQ494W8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHRFAM7AQ494W8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.13■□□□□ 0.81
CHRFAM7AQ494W8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.13■□□□□ 0.81
CHRFAM7AQ494W8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms