Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 PKC1YBL105C 3456 nt5.6□□□□□ -1.51
CLP1Q08685 GAT4YIR013C 366 nt5.59□□□□□ -1.51
CLP1Q08685 APL6YGR261C 2430 nt5.59□□□□□ -1.51
CLP1Q08685 MID1YNL291C 1647 nt5.59□□□□□ -1.52
CLP1Q08685 PMA1YGL008C 2757 nt5.58□□□□□ -1.52
CLP1Q08685 VHS2YIL135C 1311 nt5.58□□□□□ -1.52
CLP1Q08685 RPS16BYDL083C 432 nt5.58□□□□□ -1.52
CLP1Q08685 COX26YDR119W-A 201 nt5.58□□□□□ -1.52
CLP1Q08685 SEC20YDR498C 1152 nt5.58□□□□□ -1.52
CLP1Q08685 PRO3YER023W 861 nt5.58□□□□□ -1.52
CLP1Q08685 RME1YGR044C 903 nt5.58□□□□□ -1.52
CLP1Q08685 TNA1YGR260W 1605 nt5.58□□□□□ -1.52
CLP1Q08685 YML082WYML082W 1950 nt5.58□□□□□ -1.52
CLP1Q08685 GAT1YFL021W 1533 nt5.58□□□□□ -1.52
CLP1Q08685 PMT2YAL023C 2280 nt5.58□□□□□ -1.52
CLP1Q08685 KEX2YNL238W 2445 nt5.57□□□□□ -1.52
CLP1Q08685 RTT106YNL206C 1368 nt5.57□□□□□ -1.52
CLP1Q08685 YGR182CYGR182C 354 nt5.57□□□□□ -1.52
CLP1Q08685 TFS1YLR178C 660 nt5.57□□□□□ -1.52
CLP1Q08685 YLR346CYLR346C 306 nt5.57□□□□□ -1.52
CLP1Q08685 HIR1YBL008W 2523 nt5.57□□□□□ -1.52
CLP1Q08685 ERC1YHR032W 1746 nt5.57□□□□□ -1.52
CLP1Q08685 SEC9YGR009C 1956 nt5.56□□□□□ -1.52
CLP1Q08685 EEB1YPL095C 1371 nt5.56□□□□□ -1.52
CLP1Q08685 ASK10YGR097W 3441 nt5.56□□□□□ -1.52
CLP1Q08685 TRP1YDR007W 675 nt5.56□□□□□ -1.52
CLP1Q08685 SLO1YER180C-A 258 nt5.56□□□□□ -1.52
CLP1Q08685 YJR115WYJR115W 510 nt5.56□□□□□ -1.52
CLP1Q08685 ERG3YLR056W 1098 nt5.56□□□□□ -1.52
CLP1Q08685 STM1YLR150W 822 nt5.56□□□□□ -1.52
CLP1Q08685 MTQ1YNL063W 945 nt5.56□□□□□ -1.52
CLP1Q08685 SNZ2YNL333W 897 nt5.56□□□□□ -1.52
CLP1Q08685 OCA5YHL029C 2040 nt5.56□□□□□ -1.52
CLP1Q08685 CLB1YGR108W 1416 nt5.56□□□□□ -1.52
CLP1Q08685 ARN1YHL040C 1884 nt5.56□□□□□ -1.52
CLP1Q08685 NUP1YOR098C 3231 nt5.55□□□□□ -1.52
CLP1Q08685 MHR1YDR296W 681 nt5.55□□□□□ -1.52
CLP1Q08685 CAD1YDR423C 1230 nt5.55□□□□□ -1.52
CLP1Q08685 CAX4YGR036C 720 nt5.55□□□□□ -1.52
CLP1Q08685 YHR193C-AYHR193C-A 375 nt5.55□□□□□ -1.52
CLP1Q08685 YKL223WYKL223W 333 nt5.55□□□□□ -1.52
CLP1Q08685 NHP6BYBR089C-A 300 nt5.55□□□□□ -1.52
CLP1Q08685 QRI1YDL103C 1434 nt5.55□□□□□ -1.52
CLP1Q08685 ATO3YDR384C 828 nt5.54□□□□□ -1.52
CLP1Q08685 SEC13YLR208W 894 nt5.54□□□□□ -1.52
CLP1Q08685 SSO1YPL232W 873 nt5.54□□□□□ -1.52
CLP1Q08685 ECM7YLR443W 1347 nt5.53□□□□□ -1.52
CLP1Q08685 SCW4YGR279C 1161 nt5.53□□□□□ -1.52
CLP1Q08685 NME1NME1 340 nt5.53□□□□□ -1.52
CLP1Q08685 MLC2YPR188C 492 nt5.53□□□□□ -1.52
CLP1Q08685 YCL041CYCL041C 495 nt5.53□□□□□ -1.52
CLP1Q08685 HPC2YBR215W 1878 nt5.53□□□□□ -1.52
CLP1Q08685 YNL247WYNL247W 2304 nt5.53□□□□□ -1.52
CLP1Q08685 UGA1YGR019W 1416 nt5.52□□□□□ -1.53
CLP1Q08685 YDL034WYDL034W 345 nt5.52□□□□□ -1.53
CLP1Q08685 TAL1YLR354C 1008 nt5.52□□□□□ -1.53
CLP1Q08685 PGA3YML125C 939 nt5.52□□□□□ -1.53
CLP1Q08685 RPS15YOL040C 429 nt5.52□□□□□ -1.53
CLP1Q08685 MDY2YOL111C 639 nt5.52□□□□□ -1.53
CLP1Q08685 KTR3YBR205W 1215 nt5.52□□□□□ -1.53
CLP1Q08685 RGT1YKL038W 3513 nt5.51□□□□□ -1.53
CLP1Q08685 SMF2YHR050W 1650 nt5.51□□□□□ -1.53
CLP1Q08685 YLR194CYLR194C 765 nt5.51□□□□□ -1.53
CLP1Q08685 YOL097W-AYOL097W-A 186 nt5.51□□□□□ -1.53
CLP1Q08685 SEG2YKL105C 3399 nt5.51□□□□□ -1.53
CLP1Q08685 BPL1YDL141W 2073 nt5.51□□□□□ -1.53
CLP1Q08685 FET3YMR058W 1911 nt5.5□□□□□ -1.53
CLP1Q08685 ECT1YGR007W 972 nt5.5□□□□□ -1.53
CLP1Q08685 YLR283WYLR283W 945 nt5.5□□□□□ -1.53
CLP1Q08685 CBC2YPL178W 627 nt5.5□□□□□ -1.53
CLP1Q08685 TEF1YPR080W 1377 nt5.5□□□□□ -1.53
CLP1Q08685 TEF2YBR118W 1377 nt5.5□□□□□ -1.53
CLP1Q08685 GUA1YMR217W 1578 nt5.5□□□□□ -1.53
CLP1Q08685 TRK2YKR050W 2670 nt5.5□□□□□ -1.53
CLP1Q08685 YGL194C-AYGL194C-A 243 nt5.49□□□□□ -1.53
CLP1Q08685 SCO2YBR024W 906 nt5.49□□□□□ -1.53
CLP1Q08685 YOR318CYOR318C 306 nt5.49□□□□□ -1.53
CLP1Q08685 ERI1YPL096C-A 207 nt5.49□□□□□ -1.53
CLP1Q08685 MBP1YDL056W 2502 nt5.48□□□□□ -1.53
CLP1Q08685 IES1YFL013C 2079 nt5.48□□□□□ -1.53
CLP1Q08685 FUM1YPL262W 1467 nt5.48□□□□□ -1.53
CLP1Q08685 COS9YKL219W 1224 nt5.48□□□□□ -1.53
CLP1Q08685 YMR030W-AYMR030W-A 291 nt5.48□□□□□ -1.53
CLP1Q08685 SSK22YCR073C 3996 nt5.48□□□□□ -1.53
CLP1Q08685 MSC7YHR039C 1935 nt5.48□□□□□ -1.53
CLP1Q08685 NOP7YGR103W 1818 nt5.48□□□□□ -1.53
CLP1Q08685 TOS3YGL179C 1683 nt5.47□□□□□ -1.53
CLP1Q08685 GSY2YLR258W 2118 nt5.47□□□□□ -1.53
CLP1Q08685 PRM10YJL108C 1152 nt5.47□□□□□ -1.53
CLP1Q08685 SIP5YMR140W 1470 nt5.46□□□□□ -1.53
CLP1Q08685 YTA12YMR089C 2478 nt5.46□□□□□ -1.54
CLP1Q08685 tN(GUU)CtN(GUU)C 74 nt5.46□□□□□ -1.54
CLP1Q08685 tN(GUU)FtN(GUU)F 74 nt5.46□□□□□ -1.54
CLP1Q08685 tN(GUU)GtN(GUU)G 74 nt5.46□□□□□ -1.54
CLP1Q08685 tN(GUU)KtN(GUU)K 74 nt5.46□□□□□ -1.54
CLP1Q08685 tN(GUU)LtN(GUU)L 74 nt5.46□□□□□ -1.54
CLP1Q08685 tN(GUU)N1tN(GUU)N1 74 nt5.46□□□□□ -1.54
CLP1Q08685 tN(GUU)N2tN(GUU)N2 74 nt5.46□□□□□ -1.54
CLP1Q08685 tN(GUU)O1tN(GUU)O1 74 nt5.46□□□□□ -1.54
CLP1Q08685 tN(GUU)O2tN(GUU)O2 74 nt5.46□□□□□ -1.54
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms