Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 YHR045WYHR045W 1683 nt5.71□□□□□ -1.5
DNL4Q08387 CYK3YDL117W 2658 nt5.71□□□□□ -1.5
DNL4Q08387 DPH2YKL191W 1605 nt5.7□□□□□ -1.5
DNL4Q08387 ATP1YBL099W 1638 nt5.7□□□□□ -1.5
DNL4Q08387 HIR1YBL008W 2523 nt5.7□□□□□ -1.5
DNL4Q08387 IDP1YDL066W 1287 nt5.7□□□□□ -1.5
DNL4Q08387 tR(ACG)JtR(ACG)J 73 nt5.7□□□□□ -1.5
DNL4Q08387 POM33YLL023C 840 nt5.7□□□□□ -1.5
DNL4Q08387 TRP3YKL211C 1455 nt5.7□□□□□ -1.5
DNL4Q08387 RGT1YKL038W 3513 nt5.69□□□□□ -1.5
DNL4Q08387 OCA5YHL029C 2040 nt5.69□□□□□ -1.5
DNL4Q08387 CBF1YJR060W 1056 nt5.69□□□□□ -1.5
DNL4Q08387 POR1YNL055C 852 nt5.69□□□□□ -1.5
DNL4Q08387 YNL165WYNL165W 1221 nt5.69□□□□□ -1.5
DNL4Q08387 OST3YOR085W 1053 nt5.69□□□□□ -1.5
DNL4Q08387 RBD2YPL246C 789 nt5.69□□□□□ -1.5
DNL4Q08387 UBX2YML013W 1755 nt5.69□□□□□ -1.5
DNL4Q08387 SSK1YLR006C 2139 nt5.68□□□□□ -1.5
DNL4Q08387 MTC1YJL123C 1437 nt5.68□□□□□ -1.5
DNL4Q08387 SOH1YGL127C 384 nt5.68□□□□□ -1.5
DNL4Q08387 DBP8YHR169W 1296 nt5.68□□□□□ -1.5
DNL4Q08387 YIR020W-AYIR020W-A 243 nt5.68□□□□□ -1.5
DNL4Q08387 YNL019CYNL019C 855 nt5.68□□□□□ -1.5
DNL4Q08387 YNL033WYNL033W 855 nt5.68□□□□□ -1.5
DNL4Q08387 BBP1YPL255W 1158 nt5.68□□□□□ -1.5
DNL4Q08387 QDR3YBR043C 2070 nt5.68□□□□□ -1.5
DNL4Q08387 YDR396WYDR396W 501 nt5.67□□□□□ -1.5
DNL4Q08387 TDH3YGR192C 999 nt5.67□□□□□ -1.5
DNL4Q08387 EXO1YOR033C 2109 nt5.67□□□□□ -1.5
DNL4Q08387 SNT2YGL131C 4212 nt5.67□□□□□ -1.5
DNL4Q08387 YMR027WYMR027W 1413 nt5.66□□□□□ -1.5
DNL4Q08387 YGR139WYGR139W 339 nt5.66□□□□□ -1.5
DNL4Q08387 YNR042WYNR042W 429 nt5.66□□□□□ -1.5
DNL4Q08387 RER2YBR002C 861 nt5.66□□□□□ -1.5
DNL4Q08387 GUA1YMR217W 1578 nt5.66□□□□□ -1.5
DNL4Q08387 ICE2YIL090W 1476 nt5.65□□□□□ -1.5
DNL4Q08387 DEF1YKL054C 2217 nt5.65□□□□□ -1.5
DNL4Q08387 YAL056C-AYAL056C-A 351 nt5.65□□□□□ -1.5
DNL4Q08387 YMR010WYMR010W 1218 nt5.65□□□□□ -1.5
DNL4Q08387 NRM1YNR009W 750 nt5.65□□□□□ -1.5
DNL4Q08387 ETR1YBR026C 1143 nt5.65□□□□□ -1.5
DNL4Q08387 ECM33YBR078W 1290 nt5.65□□□□□ -1.5
DNL4Q08387 NTH2YBR001C 2343 nt5.65□□□□□ -1.51
DNL4Q08387 DED81YHR019C 1665 nt5.65□□□□□ -1.51
DNL4Q08387 CHL4YDR254W 1377 nt5.65□□□□□ -1.51
DNL4Q08387 ENP1YBR247C 1452 nt5.64□□□□□ -1.51
DNL4Q08387 TBF1YPL128C 1689 nt5.64□□□□□ -1.51
DNL4Q08387 ORM1YGR038W 669 nt5.64□□□□□ -1.51
DNL4Q08387 YLR317WYLR317W 435 nt5.64□□□□□ -1.51
DNL4Q08387 YOL131WYOL131W 327 nt5.64□□□□□ -1.51
DNL4Q08387 BAP2YBR068C 1830 nt5.64□□□□□ -1.51
DNL4Q08387 SIP5YMR140W 1470 nt5.64□□□□□ -1.51
DNL4Q08387 THI21YPL258C 1656 nt5.63□□□□□ -1.51
DNL4Q08387 MDY2YOL111C 639 nt5.63□□□□□ -1.51
DNL4Q08387 YAP1YML007W 1953 nt5.63□□□□□ -1.51
DNL4Q08387 ACC1YNR016C 6702 nt5.62□□□□□ -1.51
DNL4Q08387 MTQ2YDR140W 666 nt5.62□□□□□ -1.51
DNL4Q08387 YJL068CYJL068C 900 nt5.62□□□□□ -1.51
DNL4Q08387 PDR16YNL231C 1056 nt5.62□□□□□ -1.51
DNL4Q08387 ENV9YOR246C 993 nt5.62□□□□□ -1.51
DNL4Q08387 CCZ1YBR131W 2115 nt5.62□□□□□ -1.51
DNL4Q08387 PMT2YAL023C 2280 nt5.62□□□□□ -1.51
DNL4Q08387 ACF2YLR144C 2340 nt5.62□□□□□ -1.51
DNL4Q08387 PPR1YLR014C 2715 nt5.61□□□□□ -1.51
DNL4Q08387 YDR541CYDR541C 1035 nt5.61□□□□□ -1.51
DNL4Q08387 VAM7YGL212W 951 nt5.61□□□□□ -1.51
DNL4Q08387 GYP1YOR070C 1914 nt5.61□□□□□ -1.51
DNL4Q08387 HSF1YGL073W 2502 nt5.6□□□□□ -1.51
DNL4Q08387 ENT2YLR206W 1842 nt5.6□□□□□ -1.51
DNL4Q08387 MPM1YJL066C 759 nt5.6□□□□□ -1.51
DNL4Q08387 PRP45YAL032C 1140 nt5.6□□□□□ -1.51
DNL4Q08387 YNL296WYNL296W 315 nt5.6□□□□□ -1.51
DNL4Q08387 DRS1YLL008W 2259 nt5.59□□□□□ -1.51
DNL4Q08387 BNA5YLR231C 1362 nt5.59□□□□□ -1.51
DNL4Q08387 VCX1YDL128W 1236 nt5.59□□□□□ -1.51
DNL4Q08387 CKA2YOR061W 1020 nt5.59□□□□□ -1.51
DNL4Q08387 RPO26YPR187W 468 nt5.59□□□□□ -1.51
DNL4Q08387 UTP18YJL069C 1785 nt5.59□□□□□ -1.51
DNL4Q08387 YIL060WYIL060W 435 nt5.58□□□□□ -1.52
DNL4Q08387 SKG1YKR100C 1068 nt5.58□□□□□ -1.52
DNL4Q08387 IES1YFL013C 2079 nt5.58□□□□□ -1.52
DNL4Q08387 SRP101YDR292C 1866 nt5.58□□□□□ -1.52
DNL4Q08387 ELP2YGR200C 2367 nt5.57□□□□□ -1.52
DNL4Q08387 CHO1YER026C 831 nt5.57□□□□□ -1.52
DNL4Q08387 NCS6YGL211W 1080 nt5.57□□□□□ -1.52
DNL4Q08387 SPG4YMR107W 348 nt5.57□□□□□ -1.52
DNL4Q08387 SER1YOR184W 1188 nt5.57□□□□□ -1.52
DNL4Q08387 UBA2YDR390C 1911 nt5.56□□□□□ -1.52
DNL4Q08387 YCR075W-AYCR075W-A 228 nt5.56□□□□□ -1.52
DNL4Q08387 GRX4YER174C 735 nt5.56□□□□□ -1.52
DNL4Q08387 SUA5YGL169W 1281 nt5.56□□□□□ -1.52
DNL4Q08387 CSM2YIL132C 642 nt5.56□□□□□ -1.52
DNL4Q08387 ROX3YBL093C 663 nt5.56□□□□□ -1.52
DNL4Q08387 COX11YPL132W 903 nt5.56□□□□□ -1.52
DNL4Q08387 NOP2YNL061W 1857 nt5.56□□□□□ -1.52
DNL4Q08387 ULA1YPL003W 1389 nt5.55□□□□□ -1.52
DNL4Q08387 YDR134CYDR134C 411 nt5.55□□□□□ -1.52
DNL4Q08387 SPT3YDR392W 1014 nt5.55□□□□□ -1.52
DNL4Q08387 PRS1YKL181W 1284 nt5.55□□□□□ -1.52
DNL4Q08387 ATG7YHR171W 1893 nt5.55□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms