Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 RAD53YPL153C 2466 nt5.07□□□□□ -1.6
RRP40Q08285 DDC1YPL194W 1839 nt5.07□□□□□ -1.6
RRP40Q08285 KNH1YDL049C 807 nt5.07□□□□□ -1.6
RRP40Q08285 IPI1YHR085W 1005 nt5.07□□□□□ -1.6
RRP40Q08285 YHR127WYHR127W 732 nt5.07□□□□□ -1.6
RRP40Q08285 DAL3YIR032C 588 nt5.07□□□□□ -1.6
RRP40Q08285 YPR098CYPR098C 486 nt5.07□□□□□ -1.6
RRP40Q08285 YTH1YPR107C 627 nt5.07□□□□□ -1.6
RRP40Q08285 VMS1YDR049W 1899 nt5.07□□□□□ -1.6
RRP40Q08285 PHO8YDR481C 1701 nt5.06□□□□□ -1.6
RRP40Q08285 VAN1YML115C 1608 nt5.06□□□□□ -1.6
RRP40Q08285 TEA1YOR337W 2280 nt5.06□□□□□ -1.6
RRP40Q08285 TRP1YDR007W 675 nt5.06□□□□□ -1.6
RRP40Q08285 YDR053WYDR053W 396 nt5.06□□□□□ -1.6
RRP40Q08285 YBL044WYBL044W 369 nt5.06□□□□□ -1.6
RRP40Q08285 PGA2YNL149C 390 nt5.06□□□□□ -1.6
RRP40Q08285 CAR1YPL111W 1002 nt5.06□□□□□ -1.6
RRP40Q08285 KTR3YBR205W 1215 nt5.06□□□□□ -1.6
RRP40Q08285 SRP101YDR292C 1866 nt5.06□□□□□ -1.6
RRP40Q08285 RRN3YKL125W 1884 nt5.06□□□□□ -1.6
RRP40Q08285 PPR1YLR014C 2715 nt5.06□□□□□ -1.6
RRP40Q08285 RSC2YLR357W 2670 nt5.06□□□□□ -1.6
RRP40Q08285 ABZ1YNR033W 2364 nt5.06□□□□□ -1.6
RRP40Q08285 PDC1YLR044C 1692 nt5.05□□□□□ -1.6
RRP40Q08285 HRP1YOL123W 1605 nt5.05□□□□□ -1.6
RRP40Q08285 NOP2YNL061W 1857 nt5.05□□□□□ -1.6
RRP40Q08285 SLO1YER180C-A 258 nt5.05□□□□□ -1.6
RRP40Q08285 YKL151CYKL151C 1014 nt5.05□□□□□ -1.6
RRP40Q08285 ELA1YNL230C 1140 nt5.05□□□□□ -1.6
RRP40Q08285 MMP1YLL061W 1752 nt5.05□□□□□ -1.6
RRP40Q08285 RPT6YGL048C 1218 nt5.04□□□□□ -1.6
RRP40Q08285 YGR182CYGR182C 354 nt5.04□□□□□ -1.6
RRP40Q08285 TDH3YGR192C 999 nt5.04□□□□□ -1.6
RRP40Q08285 SCW4YGR279C 1161 nt5.04□□□□□ -1.6
RRP40Q08285 DBP8YHR169W 1296 nt5.04□□□□□ -1.6
RRP40Q08285 SEC17YBL050W 879 nt5.04□□□□□ -1.6
RRP40Q08285 HFI1YPL254W 1467 nt5.04□□□□□ -1.6
RRP40Q08285 SIA1YOR137C 1869 nt5.04□□□□□ -1.6
RRP40Q08285 YMR027WYMR027W 1413 nt5.04□□□□□ -1.6
RRP40Q08285 CYK3YDL117W 2658 nt5.03□□□□□ -1.6
RRP40Q08285 RBA50YDR527W 1320 nt5.03□□□□□ -1.6
RRP40Q08285 ICE2YIL090W 1476 nt5.03□□□□□ -1.6
RRP40Q08285 HEM3YDL205C 984 nt5.03□□□□□ -1.6
RRP40Q08285 YDR401WYDR401W 564 nt5.03□□□□□ -1.6
RRP40Q08285 PRS1YKL181W 1284 nt5.03□□□□□ -1.6
RRP40Q08285 HOR7YMR251W-A 180 nt5.03□□□□□ -1.6
RRP40Q08285 YNL095CYNL095C 1929 nt5.03□□□□□ -1.6
RRP40Q08285 HXT3YDR345C 1704 nt5.03□□□□□ -1.6
RRP40Q08285 PRO3YER023W 861 nt5.02□□□□□ -1.61
RRP40Q08285 VMA16YHR026W 642 nt5.02□□□□□ -1.61
RRP40Q08285 YNL019CYNL019C 855 nt5.02□□□□□ -1.61
RRP40Q08285 YNL033WYNL033W 855 nt5.02□□□□□ -1.61
RRP40Q08285 YOR318CYOR318C 306 nt5.02□□□□□ -1.61
RRP40Q08285 ECM33YBR078W 1290 nt5.02□□□□□ -1.61
RRP40Q08285 PDH1YPR002W 1551 nt5.02□□□□□ -1.61
RRP40Q08285 NOB1YOR056C 1380 nt5.02□□□□□ -1.61
RRP40Q08285 DBF4YDR052C 2115 nt5.02□□□□□ -1.61
RRP40Q08285 UTP9YHR196W 1728 nt5.01□□□□□ -1.61
RRP40Q08285 QRI1YDL103C 1434 nt5.01□□□□□ -1.61
RRP40Q08285 GET3YDL100C 1065 nt5.01□□□□□ -1.61
RRP40Q08285 YFL064CYFL064C 525 nt5.01□□□□□ -1.61
RRP40Q08285 CDC43YGL155W 1131 nt5.01□□□□□ -1.61
RRP40Q08285 YGL194C-AYGL194C-A 243 nt5.01□□□□□ -1.61
RRP40Q08285 MND2YIR025W 1107 nt5.01□□□□□ -1.61
RRP40Q08285 SPG4YMR107W 348 nt5.01□□□□□ -1.61
RRP40Q08285 ROX3YBL093C 663 nt5.01□□□□□ -1.61
RRP40Q08285 YPR202WYPR202W 717 nt5.01□□□□□ -1.61
RRP40Q08285 DFG5YMR238W 1377 nt5.01□□□□□ -1.61
RRP40Q08285 ULA1YPL003W 1389 nt5.01□□□□□ -1.61
RRP40Q08285 NTH2YBR001C 2343 nt5.01□□□□□ -1.61
RRP40Q08285 YEL077CYEL077C 3834 nt5.01□□□□□ -1.61
RRP40Q08285 DPH2YKL191W 1605 nt5.01□□□□□ -1.61
RRP40Q08285 FOB1YDR110W 1701 nt5□□□□□ -1.61
RRP40Q08285 RPT2YDL007W 1314 nt5□□□□□ -1.61
RRP40Q08285 GLO2YDR272W 825 nt5□□□□□ -1.61
RRP40Q08285 YJL068CYJL068C 900 nt5□□□□□ -1.61
RRP40Q08285 CBF1YJR060W 1056 nt5□□□□□ -1.61
RRP40Q08285 RPS19BYNL302C 435 nt5□□□□□ -1.61
RRP40Q08285 GPM3YOL056W 912 nt5□□□□□ -1.61
RRP40Q08285 RER2YBR002C 861 nt5□□□□□ -1.61
RRP40Q08285 OST3YOR085W 1053 nt5□□□□□ -1.61
RRP40Q08285 HPF1YOL155C 2904 nt5□□□□□ -1.61
RRP40Q08285 OCA5YHL029C 2040 nt5□□□□□ -1.61
RRP40Q08285 NRD1YNL251C 1728 nt5□□□□□ -1.61
RRP40Q08285 SOG2YOR353C 2376 nt4.99□□□□□ -1.61
RRP40Q08285 EXO1YOR033C 2109 nt4.99□□□□□ -1.61
RRP40Q08285 NGL2YMR285C 1548 nt4.99□□□□□ -1.61
RRP40Q08285 CKA2YOR061W 1020 nt4.99□□□□□ -1.61
RRP40Q08285 SAM4YPL273W 978 nt4.99□□□□□ -1.61
RRP40Q08285 PDB1YBR221C 1101 nt4.99□□□□□ -1.61
RRP40Q08285 SIP5YMR140W 1470 nt4.99□□□□□ -1.61
RRP40Q08285 FRE3YOR381W 2136 nt4.99□□□□□ -1.61
RRP40Q08285 SMF3YLR034C 1422 nt4.98□□□□□ -1.61
RRP40Q08285 YGL036WYGL036W 2730 nt4.98□□□□□ -1.61
RRP40Q08285 ATE1YGL017W 1512 nt4.98□□□□□ -1.61
RRP40Q08285 YGL185CYGL185C 1140 nt4.98□□□□□ -1.61
RRP40Q08285 YJR085CYJR085C 318 nt4.98□□□□□ -1.61
RRP40Q08285 POM33YLL023C 840 nt4.98□□□□□ -1.61
RRP40Q08285 RPO26YPR187W 468 nt4.98□□□□□ -1.61
RRP40Q08285 QDR1YIL120W 1692 nt4.98□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 84.6 ms